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Protein Overview: CE27621

General Information:
Name(s) found: CE27621 [WormBase]
Description(s) found:
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  • WBGene00021508 status:Confirmed UniProt:Q95Y25 protein_id:CCD72814.1 [WormBase]
  • gi|17543272|ref|NP_500129.1| hypothetical protein Y41D4A.6 [Caenorhabditis elegans] [NCBI NR]
  • gi|14574316|gb|AAK68456.1|AC024775_6 Hypothetical protein Y41D4A.6 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27621 WBGene00021508 status:Partially_confirmed TR:Q95Y25 protein_id:AAK68456.1 [wormpep150.fasta]
  • 27621 WBGene00021508 status:Partially_confirmed TR:Q95Y25 protein_id:AAK68456.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • AMIDOTRANSFERASE -trna (4C506) [Caenorhabditis elegans]gi|14574316|gb|AAK68456.1| Hypothetical protein Y41D4A.6 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q95Y25 protein_id:AAK68456.1 [wormpep115.fasta.reversed]
  • CE27621 status:Partially_confirmed TR:Q95Y25 protein_id:AAK68456.1 [wormpep80.hongbin]
  • CE27621 WBGene00021508 status:Confirmed UniProt:Q95Y25_CAEEL protein_id:AAK68456.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27621 WBGene00021508 status:Confirmed UniProt:Q95Y25_CAEEL protein_id:AAK68456.1| [wormORF-contam.fasta]
  • Y41D4A.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y41D4A.6 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE27621 WBGene00021508 status:Confirmed TR:Q95Y25 protein_id:AAK68456.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • CE27621 WBGene00021508 status:Confirmed UniProt:Q95Y25 protein_id:AAK68456.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27621 WBGene00021508 status:Confirmed UniProt:Q95Y25 protein_id:CCD72814.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of U4PC78, Glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial OS=Caenorhabditis elegans GN=CELE_Y41D4A.6 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 452 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: translation [IEALink to PubMed article]
    Molecular Function: amidase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRIESSIEK AVKYRSHGIF ITETFELARQ QAKNALKNGL NPFPIAVKDC FLTNGTSTTC  60
   61 ASQMLEKYTP PVNATIVERI VARGGCIIGK TNLDEFCMGT SSALGHFGPV KSDLTEPGGT 120
  121 EDWTIPGGSS GGSAVAVQTG IADFALGSDT GGSTRNPAAF NGIFGFKPTY GVLSRNGLIP 180
  181 LVNSLDAPSI FAKTAQKCWE LLELSKGIDK NDSTSVELPE KAGISSLEGL KIGIPVEYHN 240
  241 ECLTEDAWRH WNRVTGLLKS RGAAEIHVLN LPTTRFSLAC YSVIAAADVA SNMARYDSVA 300
  301 YGHRSSSDSS TYEMYASSRS EALNTIVRRR IFAGNYFLMK QYRQKYFERA LKVRRIIHDE 360
  361 LRQAFREVDL IVTPTASGTA PKYSELRDTL FSKEDNDDYF TQAANLAGIP SISVPVGVAE 420
  421 DGLPIGVQLM ADKLQDRAVC DVAHILDGLI RK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..452] PSI-BLAST 130.0 No description for 2df4A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
    		•  7.42914157198604 bayes_pls_golite062009
  • ligase activity
    		•  3.16753436373904 bayes_pls_golite062009
  • binding
    		•  1.29965583137169 bayes_pls_golite062009
  • catalytic activity
    		•  0.906509857495572 bayes_pls_golite062009
  • protein binding
    		•  0.583347864945253 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.301483171038292 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle