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View Structure Prediction Details

Protein: CE27621
Organism: Caenorhabditis elegans
Length: 452 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27621.

Description E-value Query
Range
Subject
Range
GATA_METMA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 364...
GATA_METMA - Glutamyl-tRNA(Gln) amidotransferase subunit A OS=Methanosarcina mazei GN=gatA PE=3 SV=1
516.0 [0..2] [450..22]

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Predicted Domain #1
Region A:
Residues: [1-452]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHRIESSIEK AVKYRSHGIF ITETFELARQ QAKNALKNGL NPFPIAVKDC FLTNGTSTTC  60
   61 ASQMLEKYTP PVNATIVERI VARGGCIIGK TNLDEFCMGT SSALGHFGPV KSDLTEPGGT 120
  121 EDWTIPGGSS GGSAVAVQTG IADFALGSDT GGSTRNPAAF NGIFGFKPTY GVLSRNGLIP 180
  181 LVNSLDAPSI FAKTAQKCWE LLELSKGIDK NDSTSVELPE KAGISSLEGL KIGIPVEYHN 240
  241 ECLTEDAWRH WNRVTGLLKS RGAAEIHVLN LPTTRFSLAC YSVIAAADVA SNMARYDSVA 300
  301 YGHRSSSDSS TYEMYASSRS EALNTIVRRR IFAGNYFLMK QYRQKYFERA LKVRRIIHDE 360
  361 LRQAFREVDL IVTPTASGTA PKYSELRDTL FSKEDNDDYF TQAANLAGIP SISVPVGVAE 420
  421 DGLPIGVQLM ADKLQDRAVC DVAHILDGLI RK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 130.0
Match: 2df4A
Description: No description for 2df4A was found.

Predicted functions:

Term Confidence Notes
glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity 7.42914157198604 bayes_pls_golite062009
ligase activity 3.16753436373904 bayes_pls_golite062009
binding 1.29965583137169 bayes_pls_golite062009
catalytic activity 0.906509857495572 bayes_pls_golite062009
protein binding 0.583347864945253 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.301483171038292 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle