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Protein Overview: coh-4

General Information:
Name(s) found: coh-4 / CE27409 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00021560 locus:coh-4 status:Partially_confirmed UniProt:Q95XJ4 protein_id:CCD74327.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 609 amino acids

    Gene Ontology:
    Cellular Component: nuclear chromosome [IEALink to PubMed article]
    Biological Process: lipid storage [IMP]
    nematode larval development [IMP]
    locomotion [IMP]
    embryonic development ending in birth or egg hatching [IMP]
    positive regulation of growth rate [IMP]
    determination of adult lifespan [IMP]
    growth [IMP]
    reproduction [IMP]
    axonal fasciculation [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVISIDVPLK ASEEATVKFL LGIVFGSHKK LGLQSNRREC LRHDVLQASK LIHWILRNEK  60
   61 KNRRSLSVAC NLVYGNTIVL STQVARLLHD AIRARDIVAF TSYMAQEEER KRKTREQMEG 120
  121 DNSNKTPKKK RRQAEEFPLA PTPISVALRQ NITMPDVLSV HKNDQINVED DLAAPTMEQL 180
  181 EMMYGMLESE NRNTAIDLTF IDRYSFNDAR QNVHNLNLNM ETDFQRPSDD FIRSQLMTPT 240
  241 KSIPQEEEVF QPATHLKDVL RFAHLPIALD ETERRRSMDE EMEEARNSGI NTEFLTPQQM 300
  301 NVPRIASEIL ELDDEVLIPR TIPKAPHSAT KNQMAENEGA EEGINYKIPL RDMHHLMEDY 360
  361 SSLHFKDVEP LCRKTSKVMN LKDLLNPIPY YLRKGCNTDM WDLFKVKTRK FDSTIGRHDV 420
  421 SDTEDEDEEA ERRNRREAER ELLETIDLSQ MKFMATPLKE KSPIMTPAHR PEEIEFREEL 480
  481 EVPRLEQFEP MNVNPISPRM DEPALLEENW NSKPTWSNPI SENIADALTI RANIIHKLNS 540
  541 ECPYEVTLDS IIPLAATSRR EAARTFYTVL ELLKEREIKA IQRDPYGNID LLLSTDDIED 600
  601 IDELAMADF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..192] deduced N/A No confident structure predictions are available.
    2 View Details [193..316] deduced N/A No confident structure predictions are available.
    3 View Details [317..469] deduced N/A No confident structure predictions are available.
    4 View Details [470..609] FFAS03 1.61 Sc Smc1hd:Scc1-C complex, ATPgS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  0.683379929086364 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.16959343932447 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0949481158963694 bayes_pls_golite062009
  • DNA binding
    		•  0.00746597740509714 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle