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Protein Overview: CE27266

General Information:
Name(s) found: CE27266 [WormBase]
Description(s) found:
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  • WBGene00206367 status:Confirmed UniProt:Q9BL75 protein_id:CCD71727.1 [WormBase]
  • gi|17510147|ref|NP_490673.1| hypothetical protein Y48G1C.7 [Caenorhabditis elegans] [NCBI NR]
  • gi|13559689|gb|AAK29896.1| Hypothetical protein Y48G1C.7 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE27266 WBGene00021680 status:Partially_confirmed TR:Q9BL75 protein_id:AAK29896.1 [wormpep150.fasta]
  • 27266 WBGene00021680 status:Partially_confirmed TR:Q9BL75 protein_id:AAK29896.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative protein family member (1A570) [Caenorhabditis elegans]gi|13559689|gb|AAK29896.1| Hypothetical protein Y48G1C.7 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q9BL75 protein_id:AAK29896.1 [wormpep115.fasta.reversed]
  • CE27266 status:Partially_confirmed TR:Q9BL75 protein_id:AAK29896.1 [wormpep80.hongbin]
  • CE27266 WBGene00021680 status:Partially_confirmed UniProt:Q9BL75_CAEEL protein_id:AAK29896.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE27266 WBGene00021680 status:Partially_confirmed UniProt:Q9BL75_CAEEL protein_id:AAK29896.1| [wormORF-contam.fasta]
  • Hypothetical protein Y48G1C.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Y48G1C.7 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE27266 WBGene00021680 status:Partially_confirmed UniProt:Q9BL75 protein_id:AAK29896.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE27266 WBGene00206367 status:Confirmed UniProt:Q9BL75 protein_id:CCD71727.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 623 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed articleLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    gamete generation [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYKTCPFHL VFLYSINPRE PRLRKKIYYM METESRLVVS HALIMYDYNQ EGELPRMHGG  60
   61 YLKRFAKRAT KRPDPFFQPT QIHDIDNDVS DMSECEKECP FAVPAQAADD GSLYLQLLDM 120
  121 EFWNDRNRQL HFLVNKPSLI ESLGCLNNRV PALPPATTGK AAFVFFIDGL EVDARNLTCD 180
  181 GLVPWSENTS TNPHGITKRP KSAKQALALN REGQLRIWKT PSSHRSDLIE FQLHVYTATL 240
  241 PRCPRLRKKV TYVLKNGHQI GNAMIIYWYT EPGEMPAPVN VSTMSSAQEY SLQRLPPHIR 300
  301 EDVLRLLARM TPAEVAKVIL EKYGIQVNTK MLYYVRRREI MAATDGIRDA EDDHDPYELK 360
  361 NEMIVSAAAG DFVDDWTTDT AGASAEASEG GSRKKNVHLE EMLDERELQV SHTEEIQQPS 420
  421 SSQQQIQLPY RKAKYQEPKN FGQQSSGLPL SQSGMARGTS RNEALFRIAK NSFGSATDNE 480
  481 TFDLLFKMLF EKSEHRLLQI VNHTFGVEIM AGEEMDNGEM HLHMAPDGAI VEEIVEEEVI 540
  541 GTVGDDVNLE EEVHENEPKV YTGEKQINDV LEQVVVEEPN HHDDHPPHEL LEEDALVNPD 600
  601 DVIVDPNQLI IHDDDDQRQQ NIQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..280] MSA 2.009953 View MSA. No confident structure predictions are available.
    2 View Details [281..342] deduced N/A No confident structure predictions are available.
    3 View Details [343..405] deduced N/A No confident structure predictions are available.
    4 View Details [406..525] deduced N/A No confident structure predictions are available.
    5 View Details [526..623] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle