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Protein Overview: ttx-3

General Information:
Name(s) found: ttx-3 / CE27107 [WormBase]
Description(s) found:
Found 21 descriptions.
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  • WBGene00006654 locus:ttx-3 status:Confirmed UniProt:G5EE86 protein_id:CAB03956.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 409 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article][ISSLink to PubMed article]
    Biological Process: dauer larval development [IGILink to PubMed article]
    positive regulation of gene-specific transcription [IMPLink to PubMed article]
    thermotaxis [IGILink to PubMed article][IMPLink to PubMed articleLink to PubMed article]
    axonogenesis [IMPLink to PubMed article]
    thermosensory behavior [IGILink to PubMed article][IMPLink to PubMed articleLink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    olfactory learning [IMPLink to PubMed article]
    regulation of neuron differentiation [IMPLink to PubMed article]
    regulation of transcription [ISSLink to PubMed article]
    Molecular Function: transcription factor activity [IEALink to PubMed article][ISSLink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    sequence-specific DNA binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFQSLSADP LDSVNTTTDF NQLAQLLLML TNSSSKETIA THVVTNSVPS AFQFDWSSHF  60
   61 KEEYDLVEKL NSPQYTNLTS ISPSSSTDSN NLILRQIQIP KIEPALLNQC CLCTFAIVDK 120
  121 EISVVDGKYY HNNCLRCQMC DIPFEYSDKC YVRDGVFLCR ADHAKRYQKC CRKCEIPLNR 180
  181 EDMVMKAKEM IFHHACFVCF ICGIKLNPGD YYTMSPQGHL YCHAHYNAVR STVLCEEAAV 240
  241 ATVPAVVAPP PPPPTTTTAP PPAAPEQPPR EASTEAEAST DEDGNGSGSQ RSKRMRTSFK 300
  301 HHQLRAMKTY FALNHNPDAK DLKQLAAKTN LTKRVLQVWF QNARAKYRRE LHDGGRSSSP 360
  361 LCVSAPLASM DMNPPLSSSS SGHSTDGYQL NTPPLSSEIY SPNSNYTHL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..180] PSI-BLAST 17.522879 No description for 2dfyX was found.
    2 View Details [181..291] FFAS03 2.94 No description for 2dfyX was found.
    3 View Details [292..409] PSI-BLAST 10.522879 No description for 2dmqA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle