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Protein Overview: CE27070

General Information:
Name(s) found: CE27070 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00015887 status:Confirmed UniProt:Q9BIA9 protein_id:CCD64829.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: acyl-CoA metabolic process [IEALink to PubMed article]
    Molecular Function: acyl-CoA thioesterase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVKNVNWDS DIRHLEPLGN SWEVPSNHPV IMTTVPLKSE FKKVNNFQEI AHKFFDFTEL  60
   61 KKDSFSPSTL SNGRQAHHGA AYGGLIFSQA LAAAEKTVDE QFKPHSMHSY FILNVDTKEP 120
  121 ISYNVRRIRD GRSFITRTVE AVQKDKVCFV LQCSFHVEEK SSIIHQSEMP KVPEPEVLMS 180
  181 MRDAVPYMKE LVEKGEVTPP PAMLARLQSY DSKVYSDDQD LFEMRCTNLG NYYGFASDKK 240
  241 PELYFWMRAR GDLSNDERFH RWLIAYNSDS LLVSTAVSPH YTTGFCSSML FSLDHCVWFH 300
  301 RSEVKADEWL LFECKSRIAS GSRATIEGRI WRRDGVLIAS CQQEALVRSK SDEPSKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..357] PSI-BLAST 82.221849 Thioesterase II (TesB)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acyl-CoA thioesterase activity
    		•  2.60197973503923 bayes_pls_golite062009
  • CoA hydrolase activity
    		•  2.3187640589669 bayes_pls_golite062009
  • 3-hydroxyacyl-CoA dehydrogenase activity
    		•  1.14159464719086 bayes_pls_golite062009
  • thiolester hydrolase activity
    		•  1.14125301545576 bayes_pls_golite062009
  • catalytic activity
    		•  0.74605540351792 bayes_pls_golite062009
  • binding
    		•  0.358549779743531 bayes_pls_golite062009
  • hydrolase activity
    		•  0.093543122203219 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle