YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: bath-44

General Information:
Name(s) found: bath-44 / CE27057 [WormBase]
Description(s) found:
Found 19 descriptions.
SHOW ALL
  • WBGene00015567 locus:bath-44 status:Confirmed UniProt:Q17782 protein_id:CCD63529.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 390 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: reproduction [IMPLink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDNSLMQMRH AADSWSTSEV RSLVHKHMWT IRGFSQLECR YLETSAKIKD ITVPLTHQPS  60
   61 SSGGLPELPD ITFRIRLHPQ GNKESNKDFT FFQCFTNQAT TTTTPTFRAK FKFTVFNQRT 120
  121 EETPTTVYSG TQQLHGYFEY IRREVLVGHV QPADDLILCL TITITFDTVT KAAQNTRSVP 180
  181 PELPMPSDVT KDLENLYRSG KHADFTLVVE ERELKAHKAI LAARSPVFAA MMEPHTAEAQ 240
  241 NSRAILRDID YEVVQAILYY IYTGTCTNMG GNALDILAAA ERFALPGLKN IAEVAMRNGL 300
  301 ATETVCKNLA FAEMYGLVDF KKEAIKYICM NANAVINSEG FLRLSRQNPD LIVDIMTVLV 360
  361 NERHNSPSCF SLDGTLEPAS KRARMTETNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..173] PSI-BLAST 18.30103 Solution structure of N-terminal domain of speckle-type POZ protein
    2 View Details [174..313] PSI-BLAST 17.045757 No description for 2nn2A was found.
    3 View Details [314..390] PSI-BLAST 7.69897 No description for 2eqxA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.27961770997634 bayes_pls_golite062009
  • protein binding
    		•  1.74340583625887 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.31204855886285 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.07240204386411 bayes_pls_golite062009
  • DNA binding
    		•  0.996677220619186 bayes_pls_golite062009
  • catalytic activity
    		•  0.00622013180681097 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle