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Protein Overview: CE27054

General Information:
Name(s) found: CE27054 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00015545 status:Partially_confirmed UniProt:H2KYI4 protein_id:CCD63409.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 519 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: negative regulation of multicellular organism growth [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    Molecular Function: lipid binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIWVLLVILG LSNVTQQQSL ANSLFAEEGT SPGFVTRINK KALSIVSDQL KDRVVKFMNS  60
   61 DGLEFNISAP LTNQVRFTLR SSKIISFDEL YFDSSMSIVP QKGVSWTGTN INVTLLASFS 120
  121 LLTTQGEITG NVPLSFDKTN VELLLWTGVN GDGHLKTDLI TCKVAANNLQ LQFSQADSAL 180
  181 LANYIPHMQN FIRQTVEQVV CPSFHAELVP VLSNRIMNTP LSASLFEQYF INYALLGPVE 240
  241 FSSQAITLKH RGNSFGILRQ GRTRLNDFRL PYRSPPLQVP TADSGHMIDF YLSNYTMSSL 300
  301 LFWMDQYRKF DYEISRQATN NSALVGYLKT DCGTGDICAG TLFPALGTRF PGGEVVIKSH 360
  361 TVSYPRVVLR KNNMTIYIDS RVDAFVQQQD RSRRFLTASM NAEVKLDKPS FKDFVLHGEL 420
  421 RIDKFKVSDV ASLVDGIDEG SLEFLVNALT ELILNEDMAK KLKSGIQLPI MFDYTQQAAN 480
  481 VSIEDDMLHI SADFCATDKC ATTADNKDTD VDYYDTVQG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..519] PSI-BLAST 124.0 CRYSTAL STRUCTURE OF BPI, THE HUMAN BACTERICIDAL PERMEABILITY-INCREASING PROTEIN

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.08408523278534 bayes_pls_golite062009
  • lipopolysaccharide binding
    		•  0.95298019322944 bayes_pls_golite062009
    		• 0.77160844183613 bayes_pls_golite062009
    		• 0.23664378017719 bayes_pls_golite062009
  • cell surface binding
    		•  0.139081384648711 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle