| Protein: | CE27054 |
| Organism: | Caenorhabditis elegans |
| Length: | 519 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE27054.
| Description | E-value | Query Range |
Subject Range |
|
|
454.0 | [0..10] | [497..8] |
|
Region A: Residues: [1-519] |
1 11 21 31 41 51
| | | | | |
1 MIWVLLVILG LSNVTQQQSL ANSLFAEEGT SPGFVTRINK KALSIVSDQL KDRVVKFMNS 60
61 DGLEFNISAP LTNQVRFTLR SSKIISFDEL YFDSSMSIVP QKGVSWTGTN INVTLLASFS 120
121 LLTTQGEITG NVPLSFDKTN VELLLWTGVN GDGHLKTDLI TCKVAANNLQ LQFSQADSAL 180
181 LANYIPHMQN FIRQTVEQVV CPSFHAELVP VLSNRIMNTP LSASLFEQYF INYALLGPVE 240
241 FSSQAITLKH RGNSFGILRQ GRTRLNDFRL PYRSPPLQVP TADSGHMIDF YLSNYTMSSL 300
301 LFWMDQYRKF DYEISRQATN NSALVGYLKT DCGTGDICAG TLFPALGTRF PGGEVVIKSH 360
361 TVSYPRVVLR KNNMTIYIDS RVDAFVQQQD RSRRFLTASM NAEVKLDKPS FKDFVLHGEL 420
421 RIDKFKVSDV ASLVDGIDEG SLEFLVNALT ELILNEDMAK KLKSGIQLPI MFDYTQQAAN 480
481 VSIEDDMLHI SADFCATDKC ATTADNKDTD VDYYDTVQG
|
| Detection Method: |  |
| Confidence: | 124.0 |
| Match: | 1bp1A |
| Description: | CRYSTAL STRUCTURE OF BPI, THE HUMAN BACTERICIDAL PERMEABILITY-INCREASING PROTEIN |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 1.08408523278534 | bayes_pls_golite062009 |
| lipopolysaccharide binding | 0.95298019322944 | bayes_pls_golite062009 |
| 0.77160844183613 | bayes_pls_golite062009 | |
| 0.23664378017719 | bayes_pls_golite062009 | |
| cell surface binding | 0.139081384648711 | bayes_pls_golite062009 |
