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Protein Overview: tpxl-1

General Information:
Name(s) found: tpxl-1 / CE26990 [WormBase]
Description(s) found:
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  • WBGene00021470 locus:tpxl-1 status:Confirmed UniProt:G5EDE7 protein_id:CCD69910.1 [WormBase]
  • gi|75290996|gb|ABA18184.1| TPX2-related alternative variant a [Caenorhabditis elegans] [NCBI NR]
  • gi|25143596|ref|NP_740805.1| TPX2 (Targeting Protein for Xenopus Klp2)-Like family member (tpxl-1) [Caenorhabditis elegans] [NCBI NR]
  • gi|13786521|gb|AAK39617.1| Tpx2 (targeting protein for xenopus klp2)-like protein 1, isoform a [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE26990 WBGene00021470 locus:tpxl-1 status:Partially_confirmed TR:Q95XR5 protein_id:AAK39617.1 [wormpep150.fasta]
  • 26990 WBGene00021470 status:Partially_confirmed TR:Q95XR5 protein_id:AAK39617.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein (54.2 kD) (1C866) [Caenorhabditis elegans]gi|13786521|gb|AAK39617.1| Hypothetical protein Y39G10AR.12a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE26990 WBGene00021470 status:Partially_confirmed TR:Q95XR5 protein_id:AAK39617.1 [wormpep132.fasta]
  • 26990 WBGene00021470 locus:tpxl-1 status:Partially_confirmed TR:Q95XR5 protein_id:AAK39617.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q95XR5 protein_id:AAK39617.1 [wormpep115.fasta.reversed]
  • CE26990 status:Partially_confirmed TR:Q95XR5 protein_id:AAK39617.1 [wormpep80.hongbin]
  • CE26990 WBGene00021470 locus:tpxl-1 status:Confirmed UniProt:Q95XR5_CAEEL protein_id:AAK39617.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE26990 WBGene00021470 locus:tpxl-1 status:Confirmed UniProt:Q95XR5_CAEEL protein_id:AAK39617.1| [wormORF-contam.fasta]
  • CE26990 WBGene00021470 locus:tpxl-1 status:Confirmed TR:Q95XR5 protein_id:AAK39617.1 [wormpep160-contam.fasta]
  • Tpx2 (targeting protein for xenopus klp2)-like protein 1, isoform a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • TPX2 (Targeting Protein for Xenopus Klp2)-Like family member (tpxl-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • TPX2-related alternative variant a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE26990 WBGene00021470 locus:tpxl-1 status:Confirmed UniProt:Q95XR5 protein_id:AAK39617.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE26990 WBGene00021470 locus:tpxl-1 status:Confirmed UniProt:G5EDE7 protein_id:CCD69910.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • TPX2 (Targeting Protein for Xenopus Klp2)-Like OS=Caenorhabditis elegans GN=tpxl-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 507 amino acids

    Gene Ontology:
    Cellular Component: centrosome [IDALink to PubMed article]
    microtubule [IDALink to PubMed article]
    Biological Process: embryonic cleavage [IMPLink to PubMed article]
    spindle organization [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: protein complex binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKSQTIQEF DENFFSSFAV PKVKDYSRLS SSPSRDQPCE TSYFENHFPS LECDTPVKMQ  60
   61 LPKTKRESDD DLPSPTIDNL LSSSSESTVI NASQNDNTEE KQQQPIREPL KIVPNEDASA 120
  121 SGSGGENQLI EGLEKLSMFA PKAPEERLSQ RRRSEQRKKE EEDKRTSVIA PASGTRSRSI 180
  181 STKRSMSREP AAAAPRAPSV PRPPHNSVTR TISAPIANTG PGVITRAMAA RVAENVTKTS 240
  241 VRRSVMPLKV AQKTPVAAVK SDAATAGGDR SRDRTRRTNT TASRRSVFPN KPAAAAANTT 300
  301 PIAPPRRSAS ANKATAPTSV SKLTPKIRPI ATANRSSILR MNVVKPTVPA PAPADAQQNK 360
  361 AASRPAVPAG GAARNRQPLR VNPGTPSTTI KKPPVASSVQ RQPPTRARSV DRSGQPPISA 420
  421 STPGKASRAD LFNRLATPKV TATPTRTSHE GPASSIRKSA VRPVPSYVYS SYKGMPSAGG 480
  481 LHGIRAPSKD RSTQKPPAAA STPQSKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..197] MSA 2.160989 View MSA. No confident structure predictions are available.
    2 View Details [198..404] MSA 3.170995 View MSA. No confident structure predictions are available.
    3 View Details [405..507] MSA 2.158989 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle