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Protein Overview: xnd-1

General Information:
Name(s) found: xnd-1 / CE26863 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00001514 locus:xnd-1 status:Partially_confirmed UniProt:O45134 protein_id:CCD63124.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 702 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSEPIVANL DNSMTTEPAP AAFPPISPMS FAFMNEEERA AVKFPKVDPK PQTAKDDEPS  60
   61 TSQKTLSVDD LLIVDDDDET DSPPASSSNY EPKAHIGWAS FGDSCLPPPP KPVKKATDPN 120
  121 LPRRKVYVIR SQNTDKSKSP LVVNNQQVTL EKAQNSPKNP NPVVSKPIVL TDSDEDVDVV 180
  181 GFDEEEEAIK IMADPTRPPD LPPQRSLISR FESNRTKRDI FRNSYDSDEE EFLRSRYQRA 240
  241 VTPPPILERQ SGSTRESVSE PSEGKILEED ATLGSEHTER VGKRIELEEI NPSQLLRTKI 300
  301 SASAIPILPL SKSIMERKKV ALEMTKNAVI RQANNFRPKA KNSTVAPKSV QIPAYNHKTP 360
  361 MTFYSNMAAP AFVKGVNGRC YRCAEIQKPV DMSSFRFVDD STVIAIRAHL CDQTRVMVAR 420
  421 TAIWNREYAK RLGDRAAGTV WQKPDEVSAQ MTGFCSATVR RCIEIANMSI IPKCADRVGV 480
  481 SRNELTSLKS SFGSEKFCGQ TMRAPHVLTQ FYSVNQASMA RNREGSDGPS SSAARPVGRP 540
  541 PTTQPVETAV EKKKNDEDEK RHHPLTNFTT ASTSSQNLQD QPPPKNTVLR WSNITTPRIL 600
  601 RPPTLKTPYS LPRTAVIPVM KKKQPEIEQV QPKKDTTASL VRKRGRPRKE KPLEVQSPRK 660
  661 GLYLRFKSCT KYIVRTPIDK SVQETVNYLL DEVDKRASTS AT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] deduced N/A No confident structure predictions are available.
    2 View Details [160..349] deduced N/A No confident structure predictions are available.
    3 View Details [350..591] MSA 1.004945 View MSA. No confident structure predictions are available.
    4 View Details [592..702] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle