| Protein: | xnd-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 702 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for xnd-1.
| Description | E-value | Query Range |
Subject Range |
|
|
971.0 | [0..10] | [698..9] |
|
Region A: Residues: [1-159] |
1 11 21 31 41 51
| | | | | |
1 MSSEPIVANL DNSMTTEPAP AAFPPISPMS FAFMNEEERA AVKFPKVDPK PQTAKDDEPS 60
61 TSQKTLSVDD LLIVDDDDET DSPPASSSNY EPKAHIGWAS FGDSCLPPPP KPVKKATDPN 120
121 LPRRKVYVIR SQNTDKSKSP LVVNNQQVTL EKAQNSPKN
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [160-349] |
1 11 21 31 41 51
| | | | | |
1 PNPVVSKPIV LTDSDEDVDV VGFDEEEEAI KIMADPTRPP DLPPQRSLIS RFESNRTKRD 60
61 IFRNSYDSDE EEFLRSRYQR AVTPPPILER QSGSTRESVS EPSEGKILEE DATLGSEHTE 120
121 RVGKRIELEE INPSQLLRTK ISASAIPILP LSKSIMERKK VALEMTKNAV IRQANNFRPK 180
181 AKNSTVAPKS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [350-591] |
1 11 21 31 41 51
| | | | | |
1 VQIPAYNHKT PMTFYSNMAA PAFVKGVNGR CYRCAEIQKP VDMSSFRFVD DSTVIAIRAH 60
61 LCDQTRVMVA RTAIWNREYA KRLGDRAAGT VWQKPDEVSA QMTGFCSATV RRCIEIANMS 120
121 IIPKCADRVG VSRNELTSLK SSFGSEKFCG QTMRAPHVLT QFYSVNQASM ARNREGSDGP 180
181 SSSAARPVGR PPTTQPVETA VEKKKNDEDE KRHHPLTNFT TASTSSQNLQ DQPPPKNTVL 240
241 RW
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [592-702] |
1 11 21 31 41 51
| | | | | |
1 SNITTPRILR PPTLKTPYSL PRTAVIPVMK KKQPEIEQVQ PKKDTTASLV RKRGRPRKEK 60
61 PLEVQSPRKG LYLRFKSCTK YIVRTPIDKS VQETVNYLLD EVDKRASTSA T
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
