Protein Overview: rnf-113

General Information:
Name(s) found:	rnf-113 / CE26718 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00010476 locus:rnf-113 RING finger protein 113 homolog status:Confirmed UniProt:O17917 protein_id:CAB07242.2 [WormBase] gi\|22096264\|sp\|O17917.2\|RN113_CAEEL RecName: Full=RING finger protein 113 homolog [NCBI NR] gi\|17553966\|ref\|NP_499375.1\| RiNg Finger protein family member (rnf-113) [Caenorhabditis elegans] [NCBI NR] gi\|13548389\|emb\|CAB07242.2\| C. elegans protein K01G5.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|12276054\|gb\|AAG50239.1\|AF304126_1 RING and zinc finger protein [Caenorhabditis elegans] [NCBI NR] (O17917) Putative zinc finger protein 183 homolog [Swiss-Prot] RING finger protein 113 homolog OS=Caenorhabditis elegans GN=rnf-113 PE=2 SV=2 [Swiss-Prot] [wormpep67.fasta] CE26718 WBGene00010476 locus:tag-331 Zinc finger, C3HC4 type (RING finger) status:Confirmed SW:O17917 protein_id:CAB07242.2 [wormpep150.fasta] 26718 WBGene00010476 Zinc finger, C3HC4 type (RING finger) status:Confirmed SW:O17917 protein_id:CAB07242.2 [wormpep130-phg-ecoli-orf-rand.fasta] RING and zinc finger protein required for embryonic viability (43.4 kD) (3L846) [Caenorhabditis elegans]gi\|13548389\|emb\|CAB07242.2\| Hypothetical protein K01G5.1 [Caenorhabditis elegans]gi\|12276054\|gb\|AAG50239.1\| RING and zinc finger protein [Caenorhabdi [nrdb_11152004_Chlamydomonas] CE26718 WBGene00010476 Zinc finger, C3HC4 type (RING finger) status:Confirmed SW:O17917 protein_id:CAB07242.2 [wormpep132.fasta] 26718 WBGene00010476 locus:tag-331 Zinc finger, C3HC4 type (RING finger) status:Confirmed SW:O17917 protein_id:CAB07242.2 [wormpep150-phg-orf-ecoli-rand.fasta] Zinc finger, C3HC4 type (RING finger) status:Confirmed SW:O17917 protein_id:CAB07242.2 [wormpep115.fasta.reversed] CE26718 Zinc finger, C3HC4 type (RING finger) status:Confirmed TR:O17917 protein_id:CAB07242.2 [wormpep80.hongbin] CE26718 WBGene00010476 locus:tag-331 Zinc finger, C3HC4 type (RING finger) status:Confirmed UniProt:RN113_CAEEL protein_id:CAB07242.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE26718 WBGene00010476 locus:tag-331 Zinc finger, C3HC4 type (RING finger) status:Confirmed UniProt:RN113_CAEEL protein_id:CAB07242.2\| [wormORF-contam.fasta] Temporarily Assigned Gene name family member (tag-331) [Caenorhabditis elegans] [nr-271106-contam.fasta] Putative RING finger protein 113 homolog [nr-271106-contam.fasta] Hypothetical protein K01G5.1 [Caenorhabditis elegans] [nr-271106-contam.fasta] RING and zinc finger protein [Caenorhabditis elegans] [nr-271106-contam.fasta] CE26718 WBGene00010476 locus:rnf-113 Zinc finger, C3HC4 type (RING finger) status:Confirmed UniProt:O17917 protein_id:CAB07242.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE26718 WBGene00010476 locus:rnf-113 Zinc finger, C3HC4 type (RING finger) status:Confirmed UniProt:RN113_CAEEL protein_id:CAB07242.2 [wormbase_c-elegans_197_11-26-2008_reversed.fasta] CE26718 WBGene00010476 locus:rnf-113 status:Confirmed UniProt:O17917 protein_id:CAB07242.2 RING finger protein 113 homolog [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	384 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	oocyte construction [IMP] negative regulation of vulval development [IMP] hermaphrodite genitalia development [IMP] nematode larval development [IMP ] embryonic development ending in birth or egg hatching [IMP ] positive regulation of growth rate [IMP] growth [IMP] reproduction [IMP] positive regulation of multicellular organism growth [IMP]
Molecular Function:	nucleic acid binding [IEA] zinc ion binding [IEA] protein binding [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLFRKPKKR NAPVVRKKES SSDEDQDSEV KDVIQKRRRT NPMVQSTKQL DASTRRADNS  60
   61 SDDSDDSDDN QDIAVATHSF AASGDAGPSG PRDQGATATL EVDTDYSHDA QAQFERVQQQ 120
  121 LKEGVEKDGK ILYKGSALYG AKEAKDTAKG NAASGYNRVG PVRAPQFLRQ TVRWDFAPDI 180
  181 CKDYKETGFC TFGDSCKFVH DRSDYKHGWE IDEEYEAGKY GAEDDANYEI HEGDDTFPED 240
  241 CFICGNPFVD PIVTKCKHYF CTGCALKSFQ KSSKCPICQQ NTENIMNTAK ELLTYLKRKK 300
  301 QQQKQEAEKQ EEEKDSDDDE KPHECDDHHH HDHEDEPEEP ENDSNVPEAE EKSDEEQEIM 360
  361 MEDVEGLEGG ENDSESDDDD AEKD

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..213]	MSA	2.175996	View MSA. No confident structure predictions are available.
2	View Details	[214..384]	PSI-BLAST	19.522879	RAG1 DIMERIZATION DOMAIN

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: rnf-113

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: