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Protein Overview: rnf-113

General Information:
Name(s) found: rnf-113 / CE26718 [WormBase]
Description(s) found:
Found 25 descriptions.
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  • WBGene00010476 locus:rnf-113 RING finger protein 113 homolog status:Confirmed UniProt:O17917 protein_id:CAB07242.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 384 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oocyte construction [IMPLink to PubMed article]
    negative regulation of vulval development [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    positive regulation of multicellular organism growth [IMPLink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    zinc ion binding [IEALink to PubMed article]
    protein binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLFRKPKKR NAPVVRKKES SSDEDQDSEV KDVIQKRRRT NPMVQSTKQL DASTRRADNS  60
   61 SDDSDDSDDN QDIAVATHSF AASGDAGPSG PRDQGATATL EVDTDYSHDA QAQFERVQQQ 120
  121 LKEGVEKDGK ILYKGSALYG AKEAKDTAKG NAASGYNRVG PVRAPQFLRQ TVRWDFAPDI 180
  181 CKDYKETGFC TFGDSCKFVH DRSDYKHGWE IDEEYEAGKY GAEDDANYEI HEGDDTFPED 240
  241 CFICGNPFVD PIVTKCKHYF CTGCALKSFQ KSSKCPICQQ NTENIMNTAK ELLTYLKRKK 300
  301 QQQKQEAEKQ EEEKDSDDDE KPHECDDHHH HDHEDEPEEP ENDSNVPEAE EKSDEEQEIM 360
  361 MEDVEGLEGG ENDSESDDDD AEKD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] MSA 2.175996 View MSA. No confident structure predictions are available.
    2 View Details [214..384] PSI-BLAST 19.522879 RAG1 DIMERIZATION DOMAIN

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.24900363539031 bayes_pls_golite062009
  • protein binding
    		•  0.77927654368839 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle