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Protein Overview: CE26201

General Information:
Name(s) found: CE26201 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00013340 locus:tcc-1 status:Confirmed UniProt:Q9GRZ9 protein_id:CAC14400.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 676 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSFVDPST ALGILGGVGV FVFAIYYMIF MNRQEDNFDK AYNRDALALL TDNNEKKKQP  60
   61 KNKTKKQQQT GKKAQDAAPA PASAAPAAPN APTPTAQQQP SPKASAAPIP EKPEIQVQKV 120
  121 ESTQASAPIP APAAPTTQKS SPKERKSVNL KDLDQKKVLN KLSGLPELDE AYIQFLAGAF 180
  181 RDSDAQKNNL SLEVKALNKK MTESAVKIEK LNKEKMAVEQ REKHEQAQRQ QLLQKVAQNQ 240
  241 AHESELARQI QGIEGKLRVK EQELVAAGKA VKNNEEHEKE LKLLRSTNSS FSTELKTIRK 300
  301 EHEAQLQKKQ EEWKKLHEQL EQEKEKLISE KEHAKQTHLK LAAAVENVEA ELEKQGKEWI 360
  361 QLSTHNQTLK QHNLELEAAL SVAKARDQDG EAQKWTMEKA QMIENYTRLE ALIGELNRDI 420
  421 SEFHEYKKQQ EVIVNELNHR EKAHLDTIEQ LREQISIEKS KLAELQVVLD AEKSKIVEIP 480
  481 LNQPLVVEEV IELKKTNANL AAAAPSTSSG ASKEDEETEK LKAENAQLHE KNEELRRRNM 540
  541 TILEKTEAEP GLVICERKRV AEEMGKLVKK QFKTFDDQSR YYEWLNESVS GIKKDLDSKA 600
  601 SAPAASVVAP TKAQKAPKCT AAAPAASTAA ARSTNEGECW KALKAMKDHL ELIDQLNDEQ 660
  661 ERRHQEELDA LRAQLA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..392] PSI-BLAST 41.30103 Heavy meromyosin subfragment
    2 View Details [393..525] PSI-BLAST 11.0 Tropomyosin
    3 View Details [526..676] PSI-BLAST 3.522879 No description for 2iw5A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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