YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CE25997

General Information:
Name(s) found: CE25997 [WormBase]
Description(s) found:
SHOW ONLY BEST
  • WBGene00020491 status:Partially_confirmed UniProt:Q966F6 protein_id:AAK84573.1 [WormBase]
  • gi|17569783|ref|NP_508223.1| hypothetical protein T13G4.4 [Caenorhabditis elegans] [NCBI NR]
  • gi|15145412|gb|AAK84573.1|AC006685_4 Hypothetical protein T13G4.4 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE25997 WBGene00020491 status:Predicted TR:Q966F6 protein_id:AAK84573.1 [wormpep150.fasta]
  • 25997 WBGene00020491 status:Predicted TR:Q966F6 protein_id:AAK84573.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, homocysteine S-methyltransferase MmuM (XB806) [Caenorhabditis elegans]gi|15145412|gb|AAK84573.1| Hypothetical protein T13G4.4 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • status:Predicted TR:Q966F6 protein_id:AAK84573.1 [wormpep115.fasta.reversed]
  • CE25997 status:Predicted TR:Q966F6 protein_id:AAK84573.1 [wormpep80.hongbin]
  • CE25997 WBGene00020491 status:Predicted UniProt:Q966F6_CAEEL protein_id:AAK84573.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE25997 WBGene00020491 status:Predicted UniProt:Q966F6_CAEEL protein_id:AAK84573.1| [wormORF-contam.fasta]
  • Hypothetical protein T13G4.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • T13G4.4 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE25997 WBGene00020491 status:Partially_confirmed UniProt:Q966F6 protein_id:AAK84573.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
    • Organism: Caenorhabditis elegans
    Length: 334 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: homocysteine S-methyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQGQPTAVL SSSFPVSYNR CTRKASCRDT LSNIFAVERI FSTFSVLFIE LCILINLDLF  60
   61 ESFRMVRLLD GSMSSQLLRF GYDCNQQENK PHWSFPANAD MELMENVYKS FLDLEVKVIT 120
  121 SNTYHFGSTL DKTIPENAEK RELYEKYFEE TCLKLCHLTT GSSDVEAWGS VGTLATMYHD 180
  181 LSEYTGAYMD QSEAKKTAYD YFKIILTLFH NRSSIRKLIF ETIPSADEGS VALDVLQEFP 240
  241 EFEAVISFTF KEHGCLRHGE KITSVAQQMK QSPQVLGIGI NCTDPNNVLP ALNELQPFAF 300
  301 SEVFVYPNKG DSKFLEEGYL IMPTLKVSDL CMKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..334] PSI-BLAST 62.0 Cobalamin-dependent methionine synthase (MetH) from Thermotoga maritima (Oxidized, Monoclinic)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.880273506130713 bayes_pls_golite062009
  • transferase activity
    		•  0.07092214922954 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.52

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle