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View Structure Prediction Details

Protein: CE25997
Organism: Caenorhabditis elegans
Length: 334 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE25997.

Description E-value Query
Range
Subject
Range
gi|120557905, gi... - gi|82741988|ref|ZP_00904695.1| 5-methyltetrahydrofolate--homocysteine methyltransferase [Shewanella ...
320.0 [0..63] [327..20]

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Predicted Domain #1
Region A:
Residues: [1-334]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTQGQPTAVL SSSFPVSYNR CTRKASCRDT LSNIFAVERI FSTFSVLFIE LCILINLDLF  60
   61 ESFRMVRLLD GSMSSQLLRF GYDCNQQENK PHWSFPANAD MELMENVYKS FLDLEVKVIT 120
  121 SNTYHFGSTL DKTIPENAEK RELYEKYFEE TCLKLCHLTT GSSDVEAWGS VGTLATMYHD 180
  181 LSEYTGAYMD QSEAKKTAYD YFKIILTLFH NRSSIRKLIF ETIPSADEGS VALDVLQEFP 240
  241 EFEAVISFTF KEHGCLRHGE KITSVAQQMK QSPQVLGIGI NCTDPNNVLP ALNELQPFAF 300
  301 SEVFVYPNKG DSKFLEEGYL IMPTLKVSDL CMKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 62.0
Match: 1q7mA
Description: Cobalamin-dependent methionine synthase (MetH) from Thermotoga maritima (Oxidized, Monoclinic)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.880273506130713 bayes_pls_golite062009
transferase activity 0.07092214922954 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle