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Protein Overview: CE25935

General Information:
Name(s) found: CE25935 [WormBase]
Description(s) found:
Found 23 descriptions.
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  • WBGene00010624 locus:mrps-15 28S ribosomal protein S15, mitochondrial status:Partially_confirmed UniProt:Q9NAP9 protein_id:CAB97235.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 330 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IEALink to PubMed article]
    intracellular [IEALink to PubMed article]
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    translation [IEALink to PubMed article]
    Molecular Function: structural constituent of ribosome [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MINLRRFVHT SCRLERGRTA FYNVHQKVTD PAKQDPDYFE KKARELPLDQ NYIDALTKLY  60
   61 YEKIGSERDL GLKAADNLIL EKTEFGLPRI EKSKTRAKYE DLDVLSNAPE SVKKIFSVEM 120
  121 ATRKELSQEW KQSLIKSVRQ HSLDENSLEM KIAWLTALIR HWSLLVNDIG QETKKKPTWL 180
  181 THRIWLVINE RRKALRILRE RNETAFEKTI AALKISYHVP KQPAHVKTRK AWAEAQLKLR 240
  241 VENEKEKRLE ELHEKYDKEV EEHKRETQEK RKALNNELDK LAQEMRQIDV IEGKSFETVG 300
  301 KYEPALISSL TETVIHSNLF YHPPPTMTEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] deduced N/A No confident structure predictions are available.
    2 View Details [121..216] PSI-BLAST 27.69897 No description for 2qalO was found.
    3 View Details [217..330] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle