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Protein Overview: CE25832

General Information:
Name(s) found: CE25832 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00016887 status:Predicted UniProt:Q9N4K4 protein_id:CCD64693.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 649 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: translational termination [IEALink to PubMed article]
    Molecular Function: translation release factor activity, codon specific [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKVNAAMVP LKQQIDQWGN TANEVLKVSQ EILIDVKVGI IQPELKRDEI LKNHVDVVGI  60
   61 LKILENLDDW ITKMIRKNAE ISANLELVTR NTKSLQEHAA QKEFVKLAKR LGYMRTELEG 120
  121 IIDSLPESPI ESKKEGSQAK ILVNPNEQNM KLILDSLKAL ETRLDVFEAS NKKPCYGNKK 180
  181 KRYAETKYSS DDSDAMESYS DGSVVVLKDS VRSDTSSSEL LKTSTTAQQE RTQKRYLKMK 240
  241 LQEPKKFDGV NKLEYEEWKI IFMEGYGKNP ELSKKSKLIQ LKSCVTGRAQ SLLSGLQITS 300
  301 GNYKVAWKIL DHNFLSNARP LDEIEKRFRN AKIDQENYDQ MKLDIGIITS LVYDMKNRGL 360
  361 NVDTPSIYQS IIGKLPSSIA EDVLIKTQSS KFNGEFHKVE RWIDRKINAK MAINEYRDEK 420
  421 KGLKNFDLED EANEVEEWTD GDDTSENGFR NEGDLPEEFG HGNSGYDKAA SKTEPPKENI 480
  481 SGTSEELKWS TSARKDYALS KIGTYGTETV GNSVHGERLP KNVKIGVAYH NVDIVSRNKF 540
  541 AIEIIVTKKD TIPDKATVNR DVPTCHLFGA GSVANSVNNK YSLLHDFHIC IFSRLITQLS 600
  601 LLKVVIFIAF TPRDAPGPFE LPPSTVLHLH ILPPTKETPP AVDAVDTEF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..362] PSI-BLAST 10.522879 Heavy meromyosin subfragment
    2 View Details [363..463] deduced N/A No confident structure predictions are available.
    3 View Details [464..649] MSA 11.32497 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle