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Protein Overview: CE25576

General Information:
Name(s) found: CE25576 [WormBase]
Description(s) found:
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  • WBGene00022135 status:Partially_confirmed UniProt:Q9N2Y6 protein_id:CCD74144.1 [WormBase]
  • gi|7332183|gb|AAF60870.1| Hypothetical protein Y71G10AR.1 [Caenorhabditis elegans] [NCBI NR]
  • gi|17544074|ref|NP_500176.1| hypothetical protein Y71G10AR.1 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE25576 WBGene00022135 status:Partially_confirmed TR:Q9N2Y6 protein_id:AAF60870.1 [wormpep150.fasta]
  • 25576 WBGene00022135 status:Predicted TR:Q9N2Y6 protein_id:AAF60870.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • predicted CDS, putative protein, with at least 3 transmembrane domains, of bilaterial origin (4C971) [Caenorhabditis elegans]gi|7332183|gb|AAF60870.1| Hypothetical protein Y71G10AR.1 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • 25576 WBGene00022135 status:Partially_confirmed TR:Q9N2Y6 protein_id:AAF60870.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Predicted TR:Q9N2Y6 protein_id:AAF60870.1 [wormpep115.fasta.reversed]
  • CE25576 status:Predicted TR:Q9N2Y6 protein_id:AAF60870.1 [wormpep80.hongbin]
  • CE25576 WBGene00022135 status:Partially_confirmed UniProt:Q9N2Y6_CAEEL protein_id:AAF60870.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE25576 WBGene00022135 status:Partially_confirmed UniProt:Q9N2Y6_CAEEL protein_id:AAF60870.1| [wormORF-contam.fasta]
  • Y71G10AR.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y71G10AR.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE25576 WBGene00022135 status:Partially_confirmed UniProt:Q9N2Y6 protein_id:AAF60870.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE25576 WBGene00022135 status:Partially_confirmed UniProt:Q9N2Y6 protein_id:CCD74144.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
    • Organism: Caenorhabditis elegans
    Length: 224 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: sodium ion transport [IEALink to PubMed article]
    Molecular Function: bile acid:sodium symporter activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRKSLKMSK KKCFQVPYGK IASQLVTLIL PLLIGIAIKK FKPTWAAKAR KIMRPFVIFV  60
   61 MIFVVIFGSL TNLYMFRMLT GPALIGGLAL PWCGFMFGCF AALLTKRKPE DVTAIAVETG 120
  121 IQNTGIAILL LKASFGQPDA DIGSLIPVIV AAFTPGPLLL GAAVHLTFKW MRNRRNMKCP 180
  181 DTDSIEKQGV ELIDASKLTE QQKLGLPNSQ YESLLDGATV AAAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] MSA 1.316996 View MSA. No confident structure predictions are available.
    2 View Details [68..187] MSA 12.327995 View MSA. No confident structure predictions are available.
    3 View Details [188..224] FFAS03 1.02 30S subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle