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Protein Overview: deps-1

General Information:
Name(s) found: deps-1 / CE25536 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00022034 locus:deps-1 status:Confirmed UniProt:Q9N303 protein_id:CCD73489.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 619 amino acids

    Gene Ontology:
    Cellular Component: P granule [IDA]
    Biological Process: nematode larval development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    growth [IMPLink to PubMed article]
    reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERQSKYFD YQGIVISSTG QDNQDSETDL VYLIQAHGKA APKNIMYGVS KCAFVPTNLE  60
   61 RNFDNIEEAK NLERRSKIPL KFGEVILWNE SDCDHDKRII LHIKREKPIY EASSSRNGLI 120
  121 LKVGGVIQPT STTSFWTPLC TVTMPETEAT RAEPDVWLYA WIRFETTMKS GLDPFNMTAT 180
  181 FESFDSCDPS DQARVCEAPW NAGSPDSKFG VWRPDPKPAD SDDEIDIEPR EGWHLPEDKW 240
  241 AEVIKMQLGL YVGERLLICK ELSQFDFIIP LQKPFSRGTD KTLIYPAVGE YFHFSAIWSM 300
  301 QHNGFLIYEL QPVPLLRQHV TSVNGNLLTR VVPASIRGLF VDKEGTLGLI DDPHHLLSFF 360
  361 EFHPAGYEFL KAMAEVRAVR TSENKSVRYR IVRTSGMSIF ENWLRDTQFV VGPVKGIRIN 420
  421 EDTVICAKHP NVYFKIPNNL KEGIPIGGGV QFVGKRQAGV DSEIMITECS PCPAFTCKNY 480
  481 SVSGDTRLFQ VYLKPNCDHE QLAESDSMGF VDFRELETPC RGKFLAWVRE SITVNDCRRA 540
  541 ATIMEVCSTA ICPPLIAMSA NSSRATSART TPAGSSIGSR SSIQSRASAA TSVSSNRFVG 600
  601 PSSRRTPSGT PQSSTSSRV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..216] deduced N/A No confident structure predictions are available.
    2 View Details [217..446] deduced N/A No confident structure predictions are available.
    3 View Details [447..619] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle