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Protein Overview: mdt-6

General Information:
Name(s) found: mdt-6 / CE25510 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00003164 locus:mdt-6 Mediator of RNA polymerase II transcription subunit 6 status:Partially_confirmed UniProt:Q9N337 protein_id:CCD69750.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 250 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: gonad development [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed articleLink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    Molecular Function: transcription regulator activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPRMGPPAA ARQDNPLHVS FRNPQWPPNF INKDNVLDYF CNQANAFYEM NSCNQQIRMQ  60
   61 NIVNRTVEEC LRTMPGIQYV LWYSQPPLFI ICKQRRNNVT NVSPIAYYYV INGSVHQAPD 120
  121 MYSLVQSRLL GALEPLRNAF GEVTNYSRYN TAKGYYWEFK NKPNVKKREE EKKEDEEEKL 180
  181 EDRSTNFQKT RTMMLLNQLF SEMPAEDALE REEKEEVEEE EEETLKTEEP TTSTDEPKFA 240
  241 EPTARTTSKQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] Pfam 62.853872 No description for PF04934.5 was found. No confident structure predictions are available.
    2 View Details [173..250] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle