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Protein Overview: smu-2

General Information:
Name(s) found: smu-2 / CE25338 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00004896 locus:smu-2 status:Confirmed UniProt:Q9N4U5 protein_id:CCD64715.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: mechanosensory behavior [IGI]
    lipid storage [IMP]
    nematode larval development [IGI]
    locomotion [IGI]
    embryonic development ending in birth or egg hatching [IGI]
    lipid metabolic process [IMP]
    neuron development [IGI]
    muscle organ morphogenesis [IGI]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADNPTNLRN ADFRKLLTSA RSDRPAVSAF AKPADPKTGD DKPASFKHKH LKPAKFKKPQ  60
   61 AAAHGKAKKE KTEADEDEAA LKNILKNYRD RAAERRKQGD EKEDPSKLTA AYRAVPGDAR 120
  121 SAQDQADLRK QAILESKYLG GDLEHTHLVK GLDYSLLNKV RSEIDKSDDD DDDDIDTAFD 180
  181 EKVTSSSSSS KPSEASLLAQ ELAQSHSENR MVRSLHRVLF KNEVPLHNQL FAKGRMAYVV 240
  241 ELEDEETDIP TTLLRSLHDL PRAESAQSIQ ANNLIILKLS HVLSHLRAEP KKKKKEEFRV 300
  301 QLGSRDAPGA AAAAPGAKGD SIYDDLDDYV PSRKSRDSRD AGRRGSRRDR SRDRSRDRDR 360
  361 DRDRDNRDRY FEKSANSRRE EEQNRREQQR ERERAEQERR REREKEREQE KAKEREKKRK 420
  421 ELEESSGYDE CYPGGLVEMG GAWDSDEEAD YSKMDAGPKK NQAVNRWDFD TEEEYASYME 480
  481 GREALPKAAY QYGVKNGEGG RKNKKQSAVS DAKRLDRELN EINKIMDKRK AGGDGAGGGG 540
  541 DYKKPKY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.
    2 View Details [113..467] PSI-BLAST 4.0 Heavy meromyosin subfragment
    3 View Details [468..547] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle