| Protein: | smu-2 |
| Organism: | Caenorhabditis elegans |
| Length: | 547 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for smu-2.
| Description | E-value | Query Range |
Subject Range |
|
|
212.0 | [0..20] | [546..187] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MADNPTNLRN ADFRKLLTSA RSDRPAVSAF AKPADPKTGD DKPASFKHKH LKPAKFKKPQ 60
61 AAAHGKAKKE KTEADEDEAA LKNILKNYRD RAAERRKQGD EKEDPSKLTA AY
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [113-467] |
1 11 21 31 41 51
| | | | | |
1 RAVPGDARSA QDQADLRKQA ILESKYLGGD LEHTHLVKGL DYSLLNKVRS EIDKSDDDDD 60
61 DDIDTAFDEK VTSSSSSSKP SEASLLAQEL AQSHSENRMV RSLHRVLFKN EVPLHNQLFA 120
121 KGRMAYVVEL EDEETDIPTT LLRSLHDLPR AESAQSIQAN NLIILKLSHV LSHLRAEPKK 180
181 KKKEEFRVQL GSRDAPGAAA AAPGAKGDSI YDDLDDYVPS RKSRDSRDAG RRGSRRDRSR 240
241 DRSRDRDRDR DRDNRDRYFE KSANSRREEE QNRREQQRER ERAEQERRRE REKEREQEKA 300
301 KEREKKRKEL EESSGYDECY PGGLVEMGGA WDSDEEADYS KMDAGPKKNQ AVNRW
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [468-547] |
1 11 21 31 41 51
| | | | | |
1 DFDTEEEYAS YMEGREALPK AAYQYGVKNG EGGRKNKKQS AVSDAKRLDR ELNEINKIMD 60
61 KRKAGGDGAG GGGDYKKPKY
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
