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Protein Overview: CE25196

General Information:
Name(s) found: CE25196 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00022453 status:Confirmed UniProt:Q9N489 protein_id:CCD73702.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 236 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    Biological Process: endocytosis [IEALink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGDYENVLMV KPKVFVYRIP PIGTSGHKAA DWNLDSPAWT GRMRLVAIGK RLEMRLEDGE  60
   61 TCDLYAKCPI DAHPGNAIEA VSDSSRYFVI RLQNDNGQQA FVGCGFQERG DAFDFNVTLQ 120
  121 DHFRYIERSA ELEKQDLSAG PSLDLAFKEG QTISINIGKK DKSAVSRPRP APGASTGGLV 180
  181 PLLPPPPGAG SMIRNSRPST TTTTASSSLS SAFAAPPPAP SSSTSTTATS GNLLDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] PSI-BLAST 66.09691 Solution structure of NECAP1 protein
    2 View Details [163..236] MSA 6.050994 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.597587183571285 bayes_pls_golite062009
  • protein binding
    		•  0.29116370406325 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle