YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ccb-2

General Information:
Name(s) found: ccb-2 / CE25155 [WormBase]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • WBGene00021125 locus:ccb-2 status:Partially_confirmed UniProt:O45009 protein_id:CCD73393.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 357 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: calcium ion transport [IEALink to PubMed article]
    Molecular Function: voltage-gated calcium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHSVARENLQ AYLHSYKLSS NEPGIKLMHN SQRDDQHRKD VEHFAALRAL QHSKRKHVAF  60
   61 AVQAMRDYDG SLDEKSPLKD HTISFNTNDF IHIHTKFNSD WWIGRIVRSH SEFGFVPTAR 120
  121 RLANYMVSDE DPPVKHNTSD HQDRSIWEPK CPYKVVPSSR PIVLLGPTLQ HSRLTQLLHL 180
  181 ALREEILKHF GKNMKYVKSD IGSGQQSGDR KGARWLRGLR DYDRGQDENQ EVELIMRMTS 240
  241 KLHLLLVDSP HIHTPDDVQH LPLSPIFFLI RVSDNKILAK LLRNTGTTRM AAEIEVANVL 300
  301 KTMNDDRVGG HDDEQLIARG FEMVIEENGL REATRRIISY LEKYIHALHY HHKDDEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..357] PSI-BLAST 56.0 Structural Analysis of the Voltage-Dependent Calcium Channel Beta Subunit Functional Core in Complex with Alpha1 Interaction Domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle