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Protein Overview: sel-10

General Information:
Name(s) found: sel-10 / CE25007 [WormBase]
Description(s) found:
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  • WBGene00004767 locus:sel-10 F-box\/WD repeat-containing protein sel-10 status:Confirmed UniProt:Q93794 protein_id:CAB02129.2 [WormBase]
  • gi|6434297|emb|CAB02129.2| C. elegans protein F55B12.3a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|46397875|sp|Q93794.3|SEL10_CAEEL RecName: Full=F-box/WD repeat-containing protein sel-10; AltName: Full=Suppressor/enhancer of lin-12 protein 10; AltName: Full=Egg laying defective protein 41 [NCBI NR]
  • gi|2677836|gb|AAC47809.1| SEL-10 [Caenorhabditis elegans] [NCBI NR]
  • gi|17563260|ref|NP_506421.1| Suppressor/Enhancer of Lin-12 family member (sel-10) [Caenorhabditis elegans] [NCBI NR]
  • F-box/WD repeat-containing protein sel-10 OS=Caenorhabditis elegans GN=sel-10 PE=1 SV=3 [Swiss-Prot]
  • (Q93794) F-box/WD-repeat protein sel-10 (Suppressor/enhancer of lin-12) (Sel-10 protein) [Swiss-Prot]
  • [wormpep67.fasta]
  • CE25007 WBGene00004767 locus:sel-10 Candida CDC4 protein like status:Confirmed SW:Q93794 protein_id:CAB02129.2 [wormpep150.fasta]
  • 25007 WBGene00004767 locus:sel-10 Candida CDC4 protein like status:Confirmed SW:Q93794 protein_id:CAB02129.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • Suppressor/Enhancer of Lin-12 SEL-10, EGg Laying defective EGL-41, CDC4 family F box proteins with WD40 motifs, Drosophila archipelago homologs, and tRNA-nucleotidyltransferase, with 5' 3' overlap of the transcripts (65.3 kD) (sel-10Co) [Caenorhabditis el [nrdb_11152004_Chlamydomonas]
  • locus:sel-10 Candida CDC4 protein like status:Confirmed TN:CAB02129 protein_id:CAB02129.2 [wormpep115.fasta.reversed]
  • CE25007 Candida CDC4 protein like status:Confirmed SW:Q93794 protein_id:CAB02129.2 [wormpep80.hongbin]
  • CE25007 WBGene00004767 locus:sel-10 Candida CDC4 protein like status:Confirmed UniProt:SEL10_CAEEL protein_id:CAB02129.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE25007 WBGene00004767 locus:sel-10 Candida CDC4 protein like status:Confirmed UniProt:SEL10_CAEEL protein_id:CAB02129.2| [wormORF-contam.fasta]
  • Suppressor/Enhancer of Lin-12 family member (sel-10) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • F-box/WD repeat protein sel-10 (Suppressor/enhancer of lin-12 protein 10) [nr-271106-contam.fasta]
  • Hypothetical protein F55B12.3a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • SEL-10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE25007 WBGene00004767 locus:sel-10 Candida CDC4 protein like status:Confirmed UniProt:Q93794 protein_id:CAB02129.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE25007 WBGene00004767 locus:sel-10 status:Confirmed UniProt:Q93794 protein_id:CAB02129.2 F-box\/WD repeat-containing protein sel-10 [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 587 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDA]
    axon [IDA]
    Biological Process: regulation of Notch signaling pathway [IGILink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWPRNDVHMD DGSMTPEDQE PVTDNDMEYN DNGEESSYSN GSSSSYNADK LSSSRPLQHK  60
   61 LDLSASPSRN NDLNPRVEHL IALFKDLSSA EQMDAFTRLL QESNMTNIRQ LRAIIEPHFQ 120
  121 RDFLSCLPVE LGMKILHNLT GYDLLKVAQV SKNWKLISEI DKIWKSLGVE EFKHHPDPTD 180
  181 RVTGAWQGTA IAAGVTIPDH IQPCDLNVHR FLKLQKFGDI FERAADKSRY LRADKIEKNW 240
  241 NANPIMGSAV LRGHEDHVIT CMQIHDDVLV TGSDDNTLKV WCIDKGEVMY TLVGHTGGVW 300
  301 TSQISQCGRY IVSGSTDRTV KVWSTVDGSL LHTLQGHTST VRCMAMAGSI LVTGSRDTTL 360
  361 RVWDVESGRH LATLHGHHAA VRCVQFDGTT VVSGGYDFTV KIWNAHTGRC IRTLTGHNNR 420
  421 VYSLLFESER SIVCSGSLDT SIRVWDFTRP EGQECVALLQ GHTSLTSGMQ LRGNILVSCN 480
  481 ADSHVRVWDI HEGTCVHMLS GHRSAITSLQ WFGRNMVATS SDDGTVKLWD IERGALIRDL 540
  541 VTLDSGGNGG CIWRLCSTST MLACAVGSRN NTEETKVILL DFDAVYP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..71] deduced N/A No confident structure predictions are available.
    2 View Details [72..587] PSI-BLAST 98.221849 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle