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Protein Overview: twk-20

General Information:
Name(s) found: twk-20 / CE24839 [WormBase]
Description(s) found:
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  • WBGene00006673 locus:twk-20 status:Confirmed UniProt:G5ECW6 protein_id:CAB61045.1 [WormBase]
  • gi|6434265|emb|CAB61045.1| C. elegans protein C40C9.1, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|3452399|gb|AAC32857.1| putative potassium channel subunit n2P20 [Caenorhabditis elegans] [NCBI NR]
  • gi|17550920|ref|NP_510284.1| TWiK family of potassium channels family member (twk-20) [Caenorhabditis elegans] [NCBI NR]
  • pir||T43361 probable potassium channel chain n2P20 - Caenorhabditis elegans [NCBI NR]
  • [wormpep67.fasta]
  • CE24839 WBGene00006673 locus:twk-20 potassium channel protein status:Confirmed TR:O76790 protein_id:CAB61045.1 [wormpep150.fasta]
  • 24839 WBGene00006673 locus:twk-20 potassium channel protein status:Confirmed TR:O76790 protein_id:CAB61045.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • TWiK family of potassium channels (41.4 kD) (twk-4) [Caenorhabditis elegans]gi|6434265|emb|CAB61045.1| Hypothetical protein C40C9.1 [Caenorhabditis elegans]gi|3452399|gb|AAC32857.1| putative potassium channel subunit n2P20 [Caenorhabditis elegans]gi|11 [nrdb_11152004_Chlamydomonas]
  • locus:twk-20 potassium channel protein status:Confirmed TR:O76790 protein_id:CAB61045.1 [wormpep115.fasta.reversed]
  • CE24839 locus:twk-4 potassium channel protein status:Confirmed TR:O76790 protein_id:CAB61045.1 [wormpep80.hongbin]
  • CE24839 WBGene00006673 locus:twk-20 potassium channel protein status:Confirmed UniProt:O76790_CAEEL protein_id:CAB61045.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24839 WBGene00006673 locus:twk-20 potassium channel protein status:Confirmed UniProt:O76790_CAEEL protein_id:CAB61045.1| [wormORF-contam.fasta]
  • Hypothetical protein C40C9.1 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • putative potassium channel subunit n2P20 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • TWiK family of potassium channels family member (twk-20) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE24839 WBGene00006673 locus:twk-20 potassium channel protein status:Confirmed UniProt:O76790 protein_id:CAB61045.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE24839 WBGene00006673 locus:twk-20 potassium channel protein status:Confirmed UniProt:G5ECW6 protein_id:CAB61045.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE24839 WBGene00006673 locus:twk-20 status:Confirmed UniProt:G5ECW6 protein_id:CAB61045.1 [wormpep246-ecoli-contam.fasta]
  • Putative potassium channel subunit n2P20 OS=Caenorhabditis elegans GN=twk-20 PE=2 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 364 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: potassium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHQIDGKSAR ALLLILSTFT YLLFGAMVFD KLESEKDTWV RDEIERITDR LKHKYNFSER  60
   61 DLHLFEAIAI KSIPQQAGYQ WQFAGAFYFA TVVITTVGYG HSAPSTNAGK LFCMIFALFG 120
  121 VPMGLIMFQS IGERVNTFIA YSLHKFRDSL HQQGFTCLQE VTPTHLLMVS LTIGFMVIVS 180
  181 GTYMFHTIEK WSIFDAYYFC MITFSTIGFG DLVPLQQVNA LQDQPLYVFA TIMFILIGLA 240
  241 VFSACVNLLV LGFMASNADE VTAAQREPPS AIVLERFTRN SLVDSQIFNI QKHSTVGVLP 300
  301 GRPRRMYSIV PNSTADVHLR RRSTRRSIQD TVCCGCFKPR PPRHRFSLTR RPTNISHLVD 360
  361 LELY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..364] PSI-BLAST 24.69897 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle