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Protein Overview: lgc-26

General Information:
Name(s) found: lgc-26 / CE24478 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00021981 locus:lgc-26 status:Partially_confirmed UniProt:Q9N4R6 protein_id:CCD70458.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 486 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: extracellular ligand-gated ion channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLRLISIG VLINFHFGNA ASQSTDERKL EAQLLKGYNS KVRPVKVEST VTQVAVYLNI  60
   61 AHVEKVDEHE QTALVHGHLM ASWTDEYLKW ERKATNISTL SIASSKLWQP ALQLYNSARG 120
  121 NSWSLYLTGL PAIVYNTGKV WSRGTFSFFV TCQFDFTNWP YDQQSCPIVI TDWVYGLGQV 180
  181 NLSDPATAAG YGKPTIRLSY DPIDETNKRH VGGWEVIDSW KKHCYWGPKG CLDAEPDGNP 240
  241 DWYWSLLEFG ITLKRHLPYF SLTIVMPMVS TSLMILLGFW IENFDFNVFL ITLNIALQAT 300
  301 YGSNILSRMP PGSGRTPKIV HLYSIGLLIS AFQVVLIVMS NFLRVRLPSH YEFDFGYDIT 360
  361 EIPKKFGLTR FFTTKGLSFD PQELLNPAQL TSEAEIQKEA STSIGISNPL AESGSDTDLL 420
  421 INLPKNSEAD LSERSETLGM PDSEKTQKES QKKMRKLEIQ LLHIKRFAFF FVIFVYLFAI 480
  481 LLVLAT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..368] PSI-BLAST 68.69897 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.
    2 View Details [369..486] PSI-BLAST 32.30103 Acetylcholine receptor protein, beta chain


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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