| Protein: | lgc-26 |
| Organism: | Caenorhabditis elegans |
| Length: | 486 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-26.
| Description | E-value | Query Range |
Subject Range |
|
|
350.0 | [0..17] | [486..95] |
|
Region A: Residues: [1-368] |
1 11 21 31 41 51
| | | | | |
1 MILLRLISIG VLINFHFGNA ASQSTDERKL EAQLLKGYNS KVRPVKVEST VTQVAVYLNI 60
61 AHVEKVDEHE QTALVHGHLM ASWTDEYLKW ERKATNISTL SIASSKLWQP ALQLYNSARG 120
121 NSWSLYLTGL PAIVYNTGKV WSRGTFSFFV TCQFDFTNWP YDQQSCPIVI TDWVYGLGQV 180
181 NLSDPATAAG YGKPTIRLSY DPIDETNKRH VGGWEVIDSW KKHCYWGPKG CLDAEPDGNP 240
241 DWYWSLLEFG ITLKRHLPYF SLTIVMPMVS TSLMILLGFW IENFDFNVFL ITLNIALQAT 300
301 YGSNILSRMP PGSGRTPKIV HLYSIGLLIS AFQVVLIVMS NFLRVRLPSH YEFDFGYDIT 360
361 EIPKKFGL
|
| Detection Method: |  |
| Confidence: | 68.69897 |
| Match: | 2bg9A |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [369-486] |
1 11 21 31 41 51
| | | | | |
1 TRFFTTKGLS FDPQELLNPA QLTSEAEIQK EASTSIGISN PLAESGSDTD LLINLPKNSE 60
61 ADLSERSETL GMPDSEKTQK ESQKKMRKLE IQLLHIKRFA FFFVIFVYLF AILLVLAT
|
| Detection Method: | |
| Confidence: | 32.30103 |
| Match: | 1oedB |
| Description: | Acetylcholine receptor protein, beta chain |
Matching Structure (courtesy of the PDB): |
|
