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Protein Overview: vbh-1

General Information:
Name(s) found: vbh-1 / CE24451 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00006888 locus:vbh-1 status:Confirmed UniProt:Q9N3F4 protein_id:CCD72826.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 641 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    ATP-dependent helicase activity [IEALink to PubMed article]
    helicase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNTQYYANHN GQQQPPQQQQ GQGWSSSYSQ QSNNMPAGGV FYNGFANGTP SNNGSSGYNN  60
   61 FADSGNGFNN NGAESNQWGG APAEYSESNL FHRTDSGINF DKYENIPVEV SGDSVPAAIE 120
  121 HFNEAGFGPA VMENVNRSGY SKPTPVQKHS IPTLLANRDL MSCAQTGSGK TAAFLLPIIQ 180
  181 HILAGGPDMV KPPAFTNGRR TYYPCALVLS PTRELAIQIH KEATKFSYKS NIQTAILYGG 240
  241 RENYRDQVNR LRAGTHILIA TPGRLIDIIE QGFIGLAGCR YLVLDEADRM LDMGFEPQIR 300
  301 KIVGQGMPPK TARTTAMFSA TFPKEIQVLA KDFLKDNYIF LAVGRVGSTS ENIEQRLLWV 360
  361 NEMEKRSNLM EILMNEHSEN LVLVFVETKR GANELAYFLN RQQIRSVSIH GDLKQIERER 420
  421 NLELFRSGQC PILVATAVAA RGLDIPNVRH VINYDLPGDS DEYVHRIGRT GRCGNLGIAT 480
  481 SFFNDKNRGI GRDLKNLIVE SNQEVPEWLH QVAAEGRIGG GQRGGNRRFG ATDYRVGRGG 540
  541 GGSFGGNFSN YNSGGATGGF GSGPAYGGSF GGGAPRRPFT NGGFGAHSSL SSTSNSGGGG 600
  601 GFSGPRRGGF NSGMNRQGGG GGGFYSNPGQ APIDHWQAPQ A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] deduced N/A No confident structure predictions are available.
    2 View Details [120..516] PSI-BLAST 103.0 No description for 2i4iA was found.
    3 View Details [517..641] PSI-BLAST 20.09691 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle