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Protein Overview: CE24439

General Information:
Name(s) found: CE24439 [WormBase]
Description(s) found:
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  • WBGene00021830 Ribosome production factor 2 homolog status:Confirmed UniProt:Q9N3F0 protein_id:CCD72829.1 [WormBase]
  • gi|7332078|gb|AAF60765.1| Hypothetical protein Y54E10A.10 [Caenorhabditis elegans] [NCBI NR]
  • gi|18203306|sp|Q9N3F0.1|BXDC1_CAEEL RecName: Full=Brix domain-containing protein 1 homolog [NCBI NR]
  • gi|17510311|ref|NP_491117.1| hypothetical protein Y54E10A.10 [Caenorhabditis elegans] [NCBI NR]
  • Ribosome production factor 2 homolog OS=Caenorhabditis elegans GN=Y54E10A.10 PE=3 SV=1 [Swiss-Prot]
  • Brix domain-containing protein 1 homolog OS=Caenorhabditis elegans GN=Y54E10A.10 PE=2 SV=1 [Swiss-Prot]
  • (Q9N3F0) Brix domain containing protein 1 homolog [Swiss-Prot]
  • [wormpep67.fasta]
  • CE24439 WBGene00021830 status:Confirmed SW:Q9N3F0 protein_id:AAF60765.1 [wormpep150.fasta]
  • 24439 WBGene00021830 status:Confirmed SW:Q9N3F0 protein_id:AAF60765.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • brix domain containing protein 1 (33.5 kD) (1D742) [Caenorhabditis elegans]gi|7332078|gb|AAF60765.1| Hypothetical protein Y54E10A.10 [Caenorhabditis elegans]gi|18203306|sp|Q9N3F0|BXD1_CAEEL Brix domain containing protein 1 homolog [nrdb_11152004_Chlamydomonas]
  • status:Confirmed SW:Q9N3F0 protein_id:AAF60765.1 [wormpep115.fasta.reversed]
  • CE24439 status:Confirmed SW:Q9N3F0 protein_id:AAF60765.1 [wormpep80.hongbin]
  • CE24439 WBGene00021830 status:Confirmed UniProt:Q9N3F0 protein_id:AAF60765.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE24439 WBGene00021830 status:Confirmed UniProt:Q9N3F0 protein_id:AAF60765.1| [wormORF-contam.fasta]
  • Y54E10A.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Brix domain-containing protein 1 homolog [nr-271106-contam.fasta]
  • Hypothetical protein Y54E10A.10 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE24439 WBGene00021830 status:Confirmed UniProt:Q9N3F0 protein_id:CCD72829.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • CE24439 WBGene00021830 status:Confirmed UniProt:Q9N3F0 protein_id:CCD72829.1 Ribosome production factor 2 homolog [wormpep246-ecoli-contam.fasta]
    • Organism: Caenorhabditis elegans
    Length: 297 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: reproduction [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRVEKIKTK KGKRVLVNRA SKTVENDKKA LFCRGAKTNE IISHAMMDLF DMKKPLTTKM  60
   61 DKHNPYHLFE DETPIVRAGS KFDTSLFVLG SNSKKKPNCL TFGRTYDGQL LDMAELRITS 120
  121 YKSSSNFEAA KMTLGSKPCV ILEGAAFESD GDMKRIGNLM VDWFRGPKVD TVRLEGLETV 180
  181 IVFTALDETN LALRVYRPML KKSATATPRV ELAEMGPSIS FEVMRKKLAD DALFKLACKK 240
  241 PKALMKKRRK NLSEDVFGNQ LARVHVGKQR TDDIQTRKVK ALRKTPLVEA APENAIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..94] PSI-BLAST 7.0 Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1
    2 View Details [95..297] FFAS03 1.52 Crystal structure of probable ribosomal biogenesis protein from Aeropyrum pernix K1


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle