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Protein Overview: hda-6

General Information:
Name(s) found: hda-6 / CE24411 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00001838 locus:hda-10 status:Confirmed UniProt:Q9U266 protein_id:CAA21669.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 517 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: histone deacetylation [ISSLink to PubMed article]
    Molecular Function: histone deacetylase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAEKKVFVI FDHQEQRHDQ PWPSYHIEVP RRLDAILERL NTTKLLTDPR IEHIPRREAE  60
   61 ESEILAVHTK RYVDDVKSTE TMTVEQQESF CTKYEDIYVN SATWHRAKLA AGASIDLMTS 120
  121 VMAAKRPGIA FIRPPGHHAM PDEGCGFCIF NNVAIAAKAA IQNGQKVLIV DYDVHAGNGT 180
  181 QECVEQMGEG NVQLISIHRY ENGHFWPNMP QTGIYHNYKN TINLPLNTIG LTDADYHALF 240
  241 THIILPTIHA FQPDLLLVSS GFDASIGDPE GSMQVTPAGF ATMIRMLIDT GIPVAALLEG 300
  301 GYFLDALAAD SEWVLRALLG EEIPRIRVEK IHSAIADTIG RVVKRYEGSC PFFKKVQELR 360
  361 GILGCRVAEE DQQEEATDYT GERTVHPPYE TRGIYTPFTE QKVAEFKDQL ESILASYTTP 420
  421 PDFSAETEAF HSAIAPHSSE INDFYFGVHE DKILLGTSPA VRLFFELLFT APYDPKHTIK 480
  481 LYGKVKPEDF GKIELDSRSL GEMKNISIFN NLPIFQL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..397] PSI-BLAST 87.045757 No description for 2nvrA was found.
    2 View Details [398..517] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle