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Protein Overview: CE24068

General Information:
Name(s) found: CE24068 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00013658 Major sperm protein status:Confirmed UniProt:Q9NAM2 protein_id:CAB54365.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 484 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: structural molecule activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRRASKRPA PYPLLCEQKP EDLLVAPVEH KVYQDFEPKR PREFSPVMAQ SLPPGEIDFQ  60
   61 PSKIIFNAPY NENQESKIKL INTSALRIAY GINTYMKRLR VDTMCTPNCG VLDPSEEILL 120
  121 TISCDAFAFG QVDTTNDRIT VEWTNTSEGS TKQFCRDWLD GDGMVRRKTL PIEYSSSPIA 180
  181 QTSSAPLLQA SKHGMWLPIG FAASELYDYA KGEPLDRKTC EKNLEKLIKN DRDVDYYEWL 240
  241 NFAKRCRTQN QNLMEEMALG MAFTTAMANK QHRKISRKAE KITEPITTNK AFSIDSAEKF 300
  301 DRALTLPSRK WFMISDVVTD GDVSNWSTAN LVTLVRALAR TVFDKVAIAD PHMMCYATSQ 360
  361 NASTYIPIAR DFFEGFAEYI LGGFGEEQSR DLKFRVRKLV TDVMGNKLDR VRGRHNKMYG 420
  421 NEASEDATRW LREQLRKEDG ELKESRLIFP NGSEMMCNYQ VNEENPEGSI KSEIFNDEEE 480
  481 VEME

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] PSI-BLAST 37.221849 Major sperm protein, MSP
    2 View Details [184..249] MSA 3.157995 View MSA. No confident structure predictions are available.
    3 View Details [250..484] MSA 1.033934 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.653234420802729 bayes_pls_golite062009
  • protein binding
    		•  0.170808849690486 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle