| Protein: | CE24068 |
| Organism: | Caenorhabditis elegans |
| Length: | 484 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE24068.
| Description | E-value | Query Range |
Subject Range |
|
|
504.0 | [0..3] | [444..8] |
|
Region A: Residues: [1-183] |
1 11 21 31 41 51
| | | | | |
1 MSRRASKRPA PYPLLCEQKP EDLLVAPVEH KVYQDFEPKR PREFSPVMAQ SLPPGEIDFQ 60
61 PSKIIFNAPY NENQESKIKL INTSALRIAY GINTYMKRLR VDTMCTPNCG VLDPSEEILL 120
121 TISCDAFAFG QVDTTNDRIT VEWTNTSEGS TKQFCRDWLD GDGMVRRKTL PIEYSSSPIA 180
181 QTS
|
| Detection Method: |  |
| Confidence: | 37.221849 |
| Match: | 1grwA |
| Description: | Major sperm protein, MSP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.653234420802729 | bayes_pls_golite062009 |
| protein binding | 0.170808849690486 | bayes_pls_golite062009 |
|
Region A: Residues: [184-249] |
1 11 21 31 41 51
| | | | | |
1 SAPLLQASKH GMWLPIGFAA SELYDYAKGE PLDRKTCEKN LEKLIKNDRD VDYYEWLNFA 60
61 KRCRTQ
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [250-484] |
1 11 21 31 41 51
| | | | | |
1 NQNLMEEMAL GMAFTTAMAN KQHRKISRKA EKITEPITTN KAFSIDSAEK FDRALTLPSR 60
61 KWFMISDVVT DGDVSNWSTA NLVTLVRALA RTVFDKVAIA DPHMMCYATS QNASTYIPIA 120
121 RDFFEGFAEY ILGGFGEEQS RDLKFRVRKL VTDVMGNKLD RVRGRHNKMY GNEASEDATR 180
181 WLREQLRKED GELKESRLIF PNGSEMMCNY QVNEENPEGS IKSEIFNDEE EVEME
|
| Detection Method: | |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
