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Protein Overview: pan-1

General Information:
Name(s) found: pan-1 / CE23886 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00003915 locus:pan-1 status:Confirmed UniProt:Q9U3A0 protein_id:CAB54282.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 594 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSLLSFVLL ALARIAISEE TKSCIDIEKG FKEEFNAHKQ PVCICADNGI FSTVKGFTIE  60
   61 CESASIASVS ENLASLNGTE LGRLTIRDST VNVLPQDLFE NVFAKQVKLE RCGLSTLQPN 120
  121 SFQSLGGSAE LLSLRENRIK KLEKGLFTGL KSLKTLDLAM NKIQEIDVGA FEELKKVEEL 180
  181 LLNENDIRVL KTGTFDGMKN LKKLTLQNCN LEIIQKGAFR GLNSLEQLIL SNNNLENIDW 240
  241 TIFSALKNLR VLDLGSNKIS NVEMKSFPKL EKLVLNNNTI DSMKSIKLKD LPSLVVALFD 300
  301 RNKIESIGDM DMFGLTRSDR IETLSLARNN LSQISPKAFQ HTPNLITLLL QYNQIEELSS 360
  361 HSPSQVRTPF LASLKKLVTL QLSSNNLSVI RSDELPKSLS SLALDHNVIS KIEARALEGM 420
  421 EIKRLYLHSN KLNYLYQGTF DSFSPKSVEA VDVSLNPWVC VCNDPKEWLP RWLEASEEAD 480
  481 VAEGALGCLA IPNCGQKEGS TVMPEEEEVY RSGWITVAAT ILTIVTIVIM VIIAMLYFKD 540
  541 ARYQFPLRGR RSDSDLHKLI ENDPLNIASD SILVVPAMPK RNTGPKKTVR FQNF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..517] PSI-BLAST 49.39794 The molecular structure of toll-like receptor 3 ligand binding domain
    2 View Details [518..594] FFAS03 1.21 Photosynthetic reaction centre; Photosystem II reaction centre subunit H, transmembrane region


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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