| Protein: | pan-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 594 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for pan-1.
| Description | E-value | Query Range |
Subject Range |
|
|
399.0 | [0..1] | [569..115] |
|
Region A: Residues: [1-517] |
1 11 21 31 41 51
| | | | | |
1 MRSLLSFVLL ALARIAISEE TKSCIDIEKG FKEEFNAHKQ PVCICADNGI FSTVKGFTIE 60
61 CESASIASVS ENLASLNGTE LGRLTIRDST VNVLPQDLFE NVFAKQVKLE RCGLSTLQPN 120
121 SFQSLGGSAE LLSLRENRIK KLEKGLFTGL KSLKTLDLAM NKIQEIDVGA FEELKKVEEL 180
181 LLNENDIRVL KTGTFDGMKN LKKLTLQNCN LEIIQKGAFR GLNSLEQLIL SNNNLENIDW 240
241 TIFSALKNLR VLDLGSNKIS NVEMKSFPKL EKLVLNNNTI DSMKSIKLKD LPSLVVALFD 300
301 RNKIESIGDM DMFGLTRSDR IETLSLARNN LSQISPKAFQ HTPNLITLLL QYNQIEELSS 360
361 HSPSQVRTPF LASLKKLVTL QLSSNNLSVI RSDELPKSLS SLALDHNVIS KIEARALEGM 420
421 EIKRLYLHSN KLNYLYQGTF DSFSPKSVEA VDVSLNPWVC VCNDPKEWLP RWLEASEEAD 480
481 VAEGALGCLA IPNCGQKEGS TVMPEEEEVY RSGWITV
|
| Detection Method: |  |
| Confidence: | 49.39794 |
| Match: | 2a0zA |
| Description: | The molecular structure of toll-like receptor 3 ligand binding domain |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [518-594] |
1 11 21 31 41 51
| | | | | |
1 AATILTIVTI VIMVIIAMLY FKDARYQFPL RGRRSDSDLH KLIENDPLNI ASDSILVVPA 60
61 MPKRNTGPKK TVRFQNF
|
| Detection Method: | |
| Confidence: | 1.21 |
| Match: | 1eysH |
| Description: | Photosynthetic reaction centre; Photosystem II reaction centre subunit H, transmembrane region |
Matching Structure (courtesy of the PDB): |
|
