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Protein Overview: ldb-1

General Information:
Name(s) found: ldb-1 / CE23789 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00002261 locus:ldb-1 status:Partially_confirmed UniProt:Q9U3E2 protein_id:CAB54257.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 629 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: mechanosensory behavior [IMPLink to PubMed article]
    vulval development [IMPLink to PubMed article]
    locomotory behavior [IMPLink to PubMed article]
    hermaphrodite genitalia development [IMPLink to PubMed article]
    locomotion [IMPLink to PubMed article]
    multicellular organismal development [IEALink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    Molecular Function: transcription factor activity [IDALink to PubMed article]
    protein binding [IDALink to PubMed article]
    transcription cofactor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCVVIFLKFL FSDNGNNQHG TEAAFGRLAQ SYRIQDLLFI IVIFFRAIHI MMFHRPPSAR  60
   61 PPLNHVDQLK SLQATALGKP GMRSQATEPQ PIGNTVSPLE FRIHDMNRRL YIFSSTGVSE 120
  121 NDQQQWWDAF SHEFFDDDCK LWFVIGSEPV AFASRERYII NRQFIPKFFR SIFDSGMREL 180
  181 QYVLRGPSRE CTLANGSQAY ENENVLQITR YDQSSQFEVN TEGKLYVEFA PFDEVMNYRI 240
  241 KAWTLELKRS NEFVYNQNTA DYRVEAQNPE QENKPRMGFF KSTFNLMTML KILDPMQSIM 300
  301 SSAKSAPAIT PREVMKRTLF QHHQVRQQNM RQQQLNQQMM IPAPEPEKPK PARKRQRKPA 360
  361 ANPRGSKKAT AAAAAAAAAA TNGVPPTVPT ASPANNQQFP PNPMTSQFQQ MSYPDVMVVG 420
  421 EPSMMGSEFG ENDERTISRV ENSQYDPNAM QMQSLGQGPN SSMNINGRNM MNQHHPGMQP 480
  481 PPGQQHMPPH SMGSQMPTSM HNPMHMPPGS MQGHGGMPPM PSTMANQMPP PNLPPHTMSN 540
  541 QMPNSRMPPM QGQMPPSGMP GQMSNPNMMG SGMPPMSMSS QMPGSMSNPM PNQMPGGMQM 600
  601 NQMPPPNYSQ YTGGPPPQWP PPNSAMITG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..76] deduced N/A No confident structure predictions are available.
    2 View Details [77..263] deduced N/A No confident structure predictions are available.
    3 View Details [264..629] PSI-BLAST 5.39794 No description for 1y0fA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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