| Protein: | ldb-1 |
| Organism: | Caenorhabditis elegans |
| Length: | 629 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ldb-1.
| Description | E-value | Query Range |
Subject Range |
|
|
405.0 | [0..68] | [443..5] |
|
Region A: Residues: [1-76] |
1 11 21 31 41 51
| | | | | |
1 MCVVIFLKFL FSDNGNNQHG TEAAFGRLAQ SYRIQDLLFI IVIFFRAIHI MMFHRPPSAR 60
61 PPLNHVDQLK SLQATA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [77-263] |
1 11 21 31 41 51
| | | | | |
1 LGKPGMRSQA TEPQPIGNTV SPLEFRIHDM NRRLYIFSST GVSENDQQQW WDAFSHEFFD 60
61 DDCKLWFVIG SEPVAFASRE RYIINRQFIP KFFRSIFDSG MRELQYVLRG PSRECTLANG 120
121 SQAYENENVL QITRYDQSSQ FEVNTEGKLY VEFAPFDEVM NYRIKAWTLE LKRSNEFVYN 180
181 QNTADYR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [264-629] |
1 11 21 31 41 51
| | | | | |
1 VEAQNPEQEN KPRMGFFKST FNLMTMLKIL DPMQSIMSSA KSAPAITPRE VMKRTLFQHH 60
61 QVRQQNMRQQ QLNQQMMIPA PEPEKPKPAR KRQRKPAANP RGSKKATAAA AAAAAAATNG 120
121 VPPTVPTASP ANNQQFPPNP MTSQFQQMSY PDVMVVGEPS MMGSEFGEND ERTISRVENS 180
181 QYDPNAMQMQ SLGQGPNSSM NINGRNMMNQ HHPGMQPPPG QQHMPPHSMG SQMPTSMHNP 240
241 MHMPPGSMQG HGGMPPMPST MANQMPPPNL PPHTMSNQMP NSRMPPMQGQ MPPSGMPGQM 300
301 SNPNMMGSGM PPMSMSSQMP GSMSNPMPNQ MPGGMQMNQM PPPNYSQYTG GPPPQWPPPN 360
361 SAMITG
|
| Detection Method: | |
| Confidence: | 5.39794 |
| Match: | 1y0fA |
| Description: | No description for 1y0fA was found. |
