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Protein Overview: ung-1

General Information:
Name(s) found: ung-1 / CE22594 [WormBase]
Description(s) found:
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  • WBGene00013241 locus:ung-1 status:Confirmed UniProt:Q9U221 protein_id:CAB60520.1 [WormBase]
  • gi|6425407|emb|CAB60520.1| C. elegans protein Y56A3A.29a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17556304|ref|NP_499560.1| Uracil DNA N-Glycosylase family member (ung-1) [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE22594 WBGene00013241 locus:ung-1 status:Partially_confirmed TR:Q9U221 protein_id:CAB60520.1 [wormpep150.fasta]
  • 22594 WBGene00013241 status:Partially_confirmed TR:Q9U221 protein_id:CAB60520.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • uracil-DNA glycosylase (31.9 kD) (3N62) [Caenorhabditis elegans]gi|6425407|emb|CAB60520.1| Hypothetical protein Y56A3A.29a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE22594 WBGene00013241 status:Partially_confirmed TR:Q9U221 protein_id:CAB60520.1 [wormpep132.fasta]
  • 22594 WBGene00013241 locus:ung-1 status:Partially_confirmed TR:Q9U221 protein_id:CAB60520.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • status:Partially_confirmed TR:Q9U221 protein_id:CAB60520.1 [wormpep115.fasta.reversed]
  • CE22594 status:Partially_confirmed TR:Q9U221 protein_id:CAB60520.1 [wormpep80.hongbin]
  • CE22594 WBGene00013241 locus:ung-1 status:Confirmed UniProt:Q9U221_CAEEL protein_id:CAB60520.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22594 WBGene00013241 locus:ung-1 status:Confirmed UniProt:Q9U221_CAEEL protein_id:CAB60520.1| [wormORF-contam.fasta]
  • Hypothetical protein Y56A3A.29a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Uracil DNA N-Glycosylase family member (ung-1) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE22594 WBGene00013241 locus:ung-1 status:Confirmed TR:Q9U221 protein_id:CAB60520.1 [WormBase_C-elegans_wp180_08-19-2007_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22594 WBGene00013241 locus:ung-1 status:Confirmed UniProt:Q9U221 protein_id:CAB60520.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE22594 WBGene00013241 locus:ung-1 status:Confirmed UniProt:Q9U221 protein_id:CAB60520.1 Uracil-DNA glycosylase [c_elegans-PRJNA13758-WS250-ecoli-contam.fasta]
  • Uracil-DNA glycosylase OS=Caenorhabditis elegans GN=ung-1 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 282 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IMPLink to PubMed article]
    base-excision repair [IEALink to PubMed article]
    Molecular Function: uracil DNA N-glycosylase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTVRIPDM FLKASAASKR KSASNTENIP EKVPAGNENQ EVKKMKLQAP EPTEILLKSL  60
   61 LTGESWSKLL EEEFKKGYIS KIEKFLNSEV NKGKQVFPPP TQIFTTFNLL PFDEISVVII 120
  121 GQDPYHDDNQ AHGLSFSVQK GVKPPPSLKN IYKELESDIE GFKRPDHGNL LGWTRQGVFM 180
  181 LNATLTVRAH EANSHAKIGW QTFTDTVIRI ISRQSEKPIV FLLWGGFAHK KEELIDTKKH 240
  241 VVIKTAHPSP LSARKWWGCK CFSKCNTELE NSGRNPINWA DL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..282] PSI-BLAST 97.0 The crystal structure of Uracil-DNA N-Glycosylase (UNG) from Deinococcus radiodurans.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle