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View Structure Prediction Details

Protein: ung-1
Organism: Caenorhabditis elegans
Length: 282 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ung-1.

Description E-value Query
Range
Subject
Range
gi|109658421, gi... - gi|76639143|ref|XP_873046.1| PREDICTED: similar to uracil-DNA glycosylase isoform UNG1 precursor iso...
399.0 [0..4] [282..26]

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Predicted Domain #1
Region A:
Residues: [1-282]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTVRIPDM FLKASAASKR KSASNTENIP EKVPAGNENQ EVKKMKLQAP EPTEILLKSL  60
   61 LTGESWSKLL EEEFKKGYIS KIEKFLNSEV NKGKQVFPPP TQIFTTFNLL PFDEISVVII 120
  121 GQDPYHDDNQ AHGLSFSVQK GVKPPPSLKN IYKELESDIE GFKRPDHGNL LGWTRQGVFM 180
  181 LNATLTVRAH EANSHAKIGW QTFTDTVIRI ISRQSEKPIV FLLWGGFAHK KEELIDTKKH 240
  241 VVIKTAHPSP LSARKWWGCK CFSKCNTELE NSGRNPINWA DL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.0
Match: 2booA
Description: The crystal structure of Uracil-DNA N-Glycosylase (UNG) from Deinococcus radiodurans.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle