Protein Overview: CE22586

General Information:
Name(s) found:	CE22586 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00013236 Zinc finger protein 593 homolog status:Confirmed UniProt:Q9U239 protein_id:CAB60500.1 [WormBase] gi\|75025352\|sp\|Q9U239.1\|ZN593_CAEEL RecName: Full=Zinc finger protein 593 homolog [NCBI NR] gi\|6425387\|emb\|CAB60500.1\| C. elegans protein Y56A3A.18, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|17556292\|ref\|NP_499552.1\| hypothetical protein Y56A3A.18 [Caenorhabditis elegans] [NCBI NR] Zinc finger protein 593 homolog OS=Caenorhabditis elegans GN=Y56A3A.18 PE=3 SV=1 [Swiss-Prot] [wormpep67.fasta] CE22586 WBGene00013236 status:Confirmed TR:Q9U239 protein_id:CAB60500.1 [wormpep150.fasta] 22586 WBGene00013236 status:Confirmed TR:Q9U239 protein_id:CAB60500.1 [wormpep130-phg-ecoli-orf-rand.fasta] putative nuclear protein of eukaryotic origin (14.6 kD) (3N8) [Caenorhabditis elegans]gi\|6425387\|emb\|CAB60500.1\| Hypothetical protein Y56A3A.18 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas] status:Confirmed TR:Q9U239 protein_id:CAB60500.1 [wormpep115.fasta.reversed] CE22586 status:Confirmed TR:Q9U239 protein_id:CAB60500.1 [wormpep80.hongbin] CE22586 WBGene00013236 status:Confirmed UniProt:ZN593_CAEEL protein_id:CAB60500.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE22586 WBGene00013236 status:Confirmed UniProt:Q9U239_CAEEL protein_id:CAB60500.1\| [wormORF-contam.fasta] Hypothetical protein Y56A3A.18 [Caenorhabditis elegans] [nr-271106-contam.fasta] Y56A3A.18 [Caenorhabditis elegans] [nr-271106-contam.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE22586 WBGene00013236 status:Confirmed UniProt:Q9U239 protein_id:CAB60500.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] CE22586 WBGene00013236 status:Confirmed UniProt:Q9U239 protein_id:CAB60500.1 Zinc finger protein 593 homolog [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	128 amino acids
Gene Ontology:
Cellular Component:	intracellular [IEA]
Biological Process:	nematode larval development [IMP] embryonic development ending in birth or egg hatching [IMP ] positive regulation of growth rate [IMP] gamete generation [IMP] growth [IMP]
Molecular Function:	nucleic acid binding [IEA] zinc ion binding [IEA]

Sequence:
Sequence: [PDR BLAST] [ProtParam]	1 11 21 31 41 51 \| \| \| \| \| \| 1 MPSGGQRKHT ISNKTRKRPG KDLDQIHEDL KPEKAAKLLQ QEIDYDLPGN GQFYCIECER 60 61 HFVDEKTRQL HRKTKLHKNR VKTLKEVPYT QAEANAAGGS GFFPAITLKT RVELPKQPEI 120 121 PIPVVAET

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

New Feature: Upload Your Own Microscopy Data

No microscopy data found in the PDR for this protein.

Protein Structure Data

[What does the above image mean?]
[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..128]	PSI-BLAST	41.045757	Solution Structure of a Human C2H2-type Zinc Finger Protein

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
binding	1.5693324142242	bayes_pls_golite062009
transcription regulator activity	1.20084827450202	bayes_pls_golite062009
DNA binding	1.11228868978256	bayes_pls_golite062009
nucleic acid binding	1.10067326005752	bayes_pls_golite062009
transcription factor activity	0.33874886911135	bayes_pls_golite062009
protein binding	0.186544761618633	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle