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Protein Overview: CE22474

General Information:
Name(s) found: CE22474 [WormBase]
Description(s) found:
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  • WBGene00013214 status:Partially_confirmed UniProt:Q9XVZ6 protein_id:CAA22456.1 [WormBase]
  • pir||T27176 probable ATP-dependent RNA helicase Y54G11A.3 [similarity] - Caenorhabditis elegans [NCBI NR]
  • gi|4008449|emb|CAA22456.1| C. elegans protein Y54G11A.3, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17537549|ref|NP_496973.1| hypothetical protein Y54G11A.3 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE22474 WBGene00013214 DEAD\/DEAH box helicase \; Helicases conserved C-terminal domain status:Partially_confirmed TR:Q9XVZ6 protein_id:CAA22456.1 [wormpep150.fasta]
  • 22474 WBGene00013214 DEAD\/DEAH box helicase \; Helicases conserved C-terminal domain status:Partially_confirmed TR:Q9XVZ6 protein_id:CAA22456.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • RNA helicase (56.8 kD) (2O573) [Caenorhabditis elegans]gi|4008449|emb|CAA22456.1| Hypothetical protein Y54G11A.3 [Caenorhabditis elegans]gi|7510202|pir||T27176 probable ATP-dependent RNA helicase Y54G11A.3 [similarity] - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • DEAD\/DEAH box helicase \; Helicases conserved C-terminal domain status:Partially_confirmed TR:Q9XVZ6 protein_id:CAA22456.1 [wormpep115.fasta.reversed]
  • CE22474 DEAD\/DEAH box helicase \; Helicases conserved C-terminal domain status:Partially_confirmed TR:Q9XVZ6 protein_id:CAA22456.1 [wormpep80.hongbin]
  • CE22474 WBGene00013214 DEAD\/DEAH box helicase \; Helicases conserved C-terminal domain status:Partially_confirmed UniProt:Q9XVZ6_CAEEL protein_id:CAA22456.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE22474 WBGene00013214 DEAD\/DEAH box helicase \; Helicases conserved C-terminal domain status:Partially_confirmed UniProt:Q9XVZ6_CAEEL protein_id:CAA22456.1| [wormORF-contam.fasta]
  • Y54G11A.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein Y54G11A.3 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE22474 WBGene00013214 DEAD\/DEAH box helicase \; Helicases conserved C-terminal domain status:Partially_confirmed UniProt:Q9XVZ6 protein_id:CAA22456.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • CE22474 WBGene00013214 status:Partially_confirmed UniProt:Q9XVZ6 protein_id:CAA22456.1 [wormpep246-ecoli-contam.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_Y54G11A.3 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 504 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: metabolic process [IEALink to PubMed article]
    DNA recombination [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    ATP binding [IEALink to PubMed article]
    oxidoreductase activity [IEALink to PubMed article]
    ATP-dependent helicase activity [IEALink to PubMed article]
    helicase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTLVQKPAE PEPLKTIESS IEDRLKDENF SWMKPIVRDL YKIPNEQKNL SPEQLQELYT  60
   61 NGGVMKVYPF REESTVKIPP PVNSFEQAFG SNASIMGEIR KNGFEKPSPI QSQMWPLLLS 120
  121 GQDCIGVSQT GSGKTLAFLL PALLHIDAQL AQYEKNDEEQ KPSPFVLVLS PTRELAQQIE 180
  181 GEVKKYSYNG YKSVCLYGGG SRPEQVEACR GGVEIVIATP GRLTDLSNDG VISLASVTYV 240
  241 VLDEADRMLD MGFEVAIRRI LFEIRPDRLV ALTSATWPEG VRKLTDKYTK EAVMAVNGSL 300
  301 DLTSCKSVTQ FFEFVPHDSR FLRVCEIVNF LTAAHGQNYK MIIFVKSKVM ADHLSSDFCM 360
  361 KGINSQGLHG GRSQSDREMS LNMLRSGEVQ ILVATDLASR GIDVPDITHV LNYDFPMDIE 420
  421 EYVHRVGRTG RAGRKGEAMS FLWWNDRSNF EGLIQILEKS EQEVPDQLRR DAEKYRLKCQ 480
  481 SGRDGPRPSF RNNKNKNSNF QASY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..504] PSI-BLAST 90.09691 No description for 2db3A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle