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Protein Overview: tgt-2

General Information:
Name(s) found: tgt-2 / CE21692 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00006567 locus:tgt-2 Queuine tRNA-ribosyltransferase subunit tgt-2 status:Confirmed UniProt:Q9NEU3 protein_id:CAC51046.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 373 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: queuosine biosynthetic process [IEALink to PubMed article]
    tRNA modification [IEALink to PubMed article]
    Molecular Function: queuine tRNA-ribosyltransferase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKFQIEKKT LLGRLGKIDT WGSVEVNHQT PSFQTYLRAG HIPHLTWEVA ENQLKLEQTH  60
   61 IFQMTLPTLV SNAKIIEKFG KGAAKFCGMP AGAAVHLTPF DPLGKLPGGY NDSKSVAIWT 120
  121 ANGKVSLDVK MWREIINSFG CGSIETLVDY DTPKDVGQKK LVKAVDRTKT FQEQLFQQDE 180
  181 KVNGERIVSL GGGFSKYHRR KCAVDVGLAE NIAGYTVEFR EFTEGKETDD KEMKELLEET 240
  241 FSPLPPTKLR CISGPFNPKT VLFLVQQGID LFDSSFPVKL AEEGHAFCLS DDFPTSSKYE 300
  301 VVDFNNEKFA DDFTALFDGC ACYTCTKYTK GYLQHLLNTR ELLASILLVI HNMTEYDKMF 360
  361 KLIRSSLENS EGL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..373] PSI-BLAST 129.0 Y106F mutant of Z. mobilis TGT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.49162878803516 bayes_pls_golite062009
  • transferase activity
    		•  0.93052611384477 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.7591440482588 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  0.75252631960909 bayes_pls_golite062009
  • queuine tRNA-ribosyltransferase activity
    		•  0.74327542322704 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle