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Protein Overview: CE21678

General Information:
Name(s) found: CE21678 [WormBase]
Description(s) found:
Found 18 descriptions.
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  • WBGene00012666 status:Confirmed UniProt:Q9NES9 protein_id:CAC51075.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 129 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nematode larval development [IMPLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed articleLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed articleLink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    iron-sulfur cluster assembly [IEALink to PubMed article]
    Molecular Function: protein binding [IEALink to PubMed article]
    iron ion binding [IEALink to PubMed article]
    iron-sulfur cluster binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKFGGATAK VIKGALKVRQ TRAALTLTNE AVSRIRVLLA QQNDANALKI GVRQKGCNGL  60
   61 TYTLEYAKDK QKFDEEVEQD GIKVWIEPKA QLSLLGSEMD YVTDKLSSEF VFRNPNIKGT 120
  121 CGCGESFSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] PSI-BLAST 38.0 E.coli IscA crystal structure to 2.3 A

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 2 iron, 2 sulfur cluster binding
    		•  1.80248983815833 bayes_pls_golite062009
  • iron-sulfur cluster binding
    		•  1.47577968990921 bayes_pls_golite062009
  • metal cluster binding
    		•  1.47577968990921 bayes_pls_golite062009
  • binding
    		•  0.287940710403657 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle