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Protein Overview: clec-104

General Information:
Name(s) found: clec-104 / CE21406 [WormBase]
Description(s) found:
Found 17 descriptions.
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  • WBGene00012480 locus:clec-104 status:Partially_confirmed UniProt:Q9XW21 protein_id:CAA22313.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 241 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEALink to PubMed article]
    Biological Process: positive regulation of vulval development [IMP]
    Molecular Function: sugar binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRSILLLLLA ASIASAIFAP GASGGFGGGG FGSRSSSSSS EEGRGHHGHG HGHHHGRPPR  60
   61 PRPPRPPVSR EPECPSDWLS FDRPQGVWCV KVFYESLTQP IAESRCQAQG ATLSGYQNAN 120
  121 ERMQVSYAAR TLTNQNGGGL AEVWVGAYRK ARCPNKPSCT PLDTFEWTDG HTTGTDGFHY 180
  181 PGTEPNGYVN EHGQQYCMEM HIHPSSDTEA ARYGYHQGDL DDMLCVVPVR LYACGKVPEQ 240
  241 V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..241] PSI-BLAST 22.522879 Crystal Structure of a fragment of DC-SIGNR (containg the carbohydrate recognition domain and two repeats of the neck) complexed with Lewis-x.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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