Protein Overview: rad-50

General Information:
Name(s) found:	rad-50 / CE21149 [WormBase]
Description(s) found: SHOW ONLY BEST	WBGene00004296 locus:rad-50 DNA repair protein rad-50 status:Confirmed UniProt:O44199 protein_id:CAB01581.1 [WormBase] pir\|\|T24480 hypothetical protein T04H1.4 - Caenorhabditis elegans [NCBI NR] gi\|68062283\|sp\|O44199.1\|RAD50_CAEEL RecName: Full=DNA repair protein rad-50 [NCBI NR] gi\|4008379\|emb\|CAB01581.1\| C. elegans protein T04H1.4a, confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR] gi\|2687855\|emb\|CAA99730.1\| RAD50 homologue ceRAD50 [Caenorhabditis elegans] [NCBI NR] gi\|17563838\|ref\|NP_506070.1\| RADiation sensitivity abnormal/yeast RAD-related family member (rad-50) [Caenorhabditis elegans] [NCBI NR] DNA repair protein rad-50 OS=Caenorhabditis elegans GN=rad-50 PE=2 SV=1 [Swiss-Prot] [wormpep67.fasta] CE21149 WBGene00004296 locus:rad-50 DNA repair protein RAD50 like status:Confirmed SW:O44199 protein_id:CAB01581.1 [wormpep150.fasta] 21149 WBGene00004296 locus:rad-50 DNA repair protein RAD50 like status:Confirmed TR:O44199 protein_id:CAB01581.1 [wormpep130-phg-ecoli-orf-rand.fasta] RAD50 homologue, RADiation sensitivity abnormal/yeast RAD-related RAD-50 (150.3 kD) (rad-50) [Caenorhabditis elegans]gi\|4008379\|emb\|CAB01581.1\| Hypothetical protein T04H1.4 [Caenorhabditis elegans]gi\|7507111\|pir\|\|T24480 hypothetical protein T04H1.4 - Ca [nrdb_11152004_Chlamydomonas] CE21149 WBGene00004296 locus:rad-50 DNA repair protein RAD50 like status:Confirmed TR:O44199 protein_id:CAB01581.1 [wormpep132.fasta] 21149 WBGene00004296 locus:rad-50 DNA repair protein RAD50 like status:Confirmed SW:O44199 protein_id:CAB01581.1 [wormpep150-phg-orf-ecoli-rand.fasta] locus:rad-50 DNA repair protein RAD50 like status:Confirmed TR:O44199 protein_id:CAB01581.1 [wormpep115.fasta.reversed] CE21149 locus:rad-50 DNA repair protein RAD50 like status:Confirmed TR:O44199 protein_id:CAB01581.1 [wormpep80.hongbin] CE21149 WBGene00004296 locus:rad-50 DNA repair protein RAD50 like status:Confirmed UniProt:RAD50_CAEEL protein_id:CAB01581.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta] CE21149 WBGene00004296 locus:rad-50 DNA repair protein RAD50 like status:Confirmed UniProt:RAD50_CAEEL protein_id:CAB01581.1\| [wormORF-contam.fasta] Hypothetical protein T04H1.4 [Caenorhabditis elegans] [nr-271106-contam.fasta] DNA repair protein rad-50 [nr-271106-contam.fasta] RADiation sensitivity abnormal/yeast RAD-related family member (rad-50) [Caenorhabditis elegans] [nr-271106-contam.fasta] RAD50 homologue ceRAD50 [Caenorhabditis elegans] [nr-271106-contam.fasta] CE21149 WBGene00004296 locus:rad-50 DNA repair protein RAD50 like status:Confirmed UniProt:O44199 protein_id:CAB01581.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta] [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr] CE21149 WBGene00004296 locus:rad-50 status:Confirmed UniProt:O44199 protein_id:CAB01581.1 DNA repair protein rad-50 [wormpep246-ecoli-contam.fasta]
Organism:	Caenorhabditis elegans
Length:	1298 amino acids
Gene Ontology:
Cellular Component:	chromosome [IEA] Mre11 complex [IEA]
Biological Process:	DNA repair [IEA] embryonic development ending in birth or egg hatching [IMP] DNA metabolic process [IEA]
Molecular Function:	nucleotide binding [IEA] ATP binding [IEA] zinc ion binding [IEA] nuclease activity [IEA] nucleoside-triphosphatase activity [IEA]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKFLRLHIR GIRSVGDEDH DVHKIDFLSP CTLISGPNGT GKTTTIEALN FVTTGQMPTQ  60
   61 KKQNFIHSTD VARKTRVDAS VTLEFIDVKG RECTAVRRLV VTSGTKAAAL AEEHTLAIKY 120
  121 PDGTVNTLSS KVCDFNTALL KHLGVPRAVF KYVIFCHQED STWPLSEPKE LKKRFDDIFQ 180
  181 LTKFVKAQER MKKIVLDFKK EMQTHEMSKQ LYETHVRDKL VARQNQEECE RKISKRKEET 240
  241 DELKERKANG QKKIEEMRTS IHELEDTLTS FKKTELERQN LKKQLSLIRV EPYFGTEEEL 300
  301 KREIEEFRGS EGRSYGEERA RIQKKIGKNN QERQELSQKK TEFENRISSL KAEVIHCQSL 360
  361 KYDLERLENQ LRSELDLEHD ADIDIEIDNA ITLKIRGMSD KARMIAKNCA ELQSNLRTAQ 420
  421 EAATKIEVEM KTLQNEKVKL EKEVEQLKFK IKQGQNATAG MKDLLKKEEA LRKSLADLPL 480
  481 LDENALTECK LKREKYLKQL DILKKKCAEA EKNAEKDREK ESLKQTLSIA RKKMTAYQRI 540
  541 YDNNWQGLIG QAPDFPWTPI LSKTFHKLRN DKKIMEEDLR DVQLNVQKLE TMQHQYRKQE 600
  601 ESLTAQELKL SENIFEACSC EAEEVSEKLE NLRKRLKKAR KDLAPLSAKS NLYDSYIEES 660
  661 KSSGCCPLCD RDFKTKKEIN EFSKKLENMT LSFPTEQEEL EKLVSKLEKE EIIIVKAEGQ 720
  721 ANELQRIVKE LKEVREKNRK LSTEMAEEKS NLSKNEKQLE TVNAKLKLAE DLQTDVGVIQ 780
  781 QLYEQTEENE KRYEQLVSES DSSDGLSYTE LRKKVEDKDE EYRKIVQEGE ELQKCSEERN 840
  841 KLQSKLNELG THRVSLGEAA AQAGAFAEQL ETKIKEIQEC ITAISQKRNE DLPDAQFKKD 900
  901 DLTRNVSSKE EEKKKAEMEV QMMKKELDQK IFHRKSLFKK VQEGGLCERQ LMDKENNIAT 960
  961 LNASLEENQQ RQKRFEEDLR SFDSSHQRES ILKDQLTRMI IENKIKELKR TLATFDGQIN1020
 1021 EDRITEQKQA YNKLQNELRL IGNEEVKIYT QMQEYEKQKK IAEAKLSTKE CQNAESNYRD1080
 1081 AIIELAITKE SISDLTKYRN CLDASLIQFH SEKMGRVNGI IDDLWRKVYN STDITTIRIR1140
 1141 SDATSETSSK KVAYEYNVMM VHETGTEVEM RGRCSAGQKM LASLLIRIAL AEVFGGSCSM1200
 1201 IALDEPTTNL DESKVEGMAI VLADIIAERR GFDENGKLRG RDMQMVVITH DERLVNRITI1260
 1261 SCRPEYIYCL GKDEHGISFL SKRYPDGTVK RVNTKRRF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.99

Protein Overview: rad-50

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: