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Protein Overview: zyx-1

General Information:
Name(s) found: zyx-1 / CE20775 [WormBase]
Description(s) found:
Found 16 descriptions.
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  • WBGene00006999 locus:zyx-1 LIM domain containing proteins status:Confirmed UniProt:Q9U3F5 protein_id:CAB03096.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 176 amino acids

    Gene Ontology:
    Cellular Component: focal adhesion [ISSLink to PubMed article]
    actin cytoskeleton [ISSLink to PubMed article]
    Biological Process: reproduction [IMPLink to PubMed article]
    Molecular Function: zinc ion binding [IEALink to PubMed article][ISSLink to PubMed article]
    protein binding [ISSLink to PubMed article]
    DEAD/H-box RNA helicase binding [IPILink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQIFHVDCF KCGQCSKTLA GASFYNIDDK PTCEGCYQNS LEKCTACNRA ISDKLLRACG  60
   61 GVYHVNCFVC FSCKKSLDGI PFTLDKDNNV HCVPCFHDKF APRCALCSKP IVPQDGEKES 120
  121 VRVVAMDKSF HVDCYKCEDC GMQLSSKLEG QGCYPIDNHL LCKTCNGNRL RVVSST

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] PSI-BLAST 17.0 No description for 2dfyX was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle