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Protein Overview: CE20754

General Information:
Name(s) found: CE20754 [WormBase]
Description(s) found:
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  • WBGene00009502 status:Partially_confirmed UniProt:Q20112 protein_id:CAA84663.1 [WormBase]
  • pir||T21894 hypothetical protein F37A8.2 - Caenorhabditis elegans [NCBI NR]
  • gi|3892151|emb|CAA84663.1| C. elegans protein F37A8.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • gi|17553302|ref|NP_497794.1| hypothetical protein F37A8.2 [Caenorhabditis elegans] [NCBI NR]
  • [wormpep67.fasta]
  • CE20754 WBGene00009502 status:Partially_confirmed TR:Q20112 protein_id:CAA84663.1 [wormpep150.fasta]
  • 20754 WBGene00009502 status:Partially_confirmed TR:Q20112 protein_id:CAA84663.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • putative nuclear protein family member (3F20) [Caenorhabditis elegans]gi|3892151|emb|CAA84663.1| Hypothetical protein F37A8.2 [Caenorhabditis elegans]gi|7500694|pir||T21894 hypothetical protein F37A8.2 - Caenorhabditis elegans [nrdb_11152004_Chlamydomonas]
  • status:Partially_confirmed TR:Q20112 protein_id:CAA84663.1 [wormpep115.fasta.reversed]
  • CE20754 status:Partially_confirmed TR:Q20112 protein_id:CAA84663.1 [wormpep80.hongbin]
  • CE20754 WBGene00009502 status:Partially_confirmed UniProt:Q20112_CAEEL protein_id:CAA84663.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • C. elegans protein F37A8.2, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI-RefSeq_human_na_10-15-2008_con_reversed.fasta]
  • CE20754 WBGene00009502 status:Partially_confirmed UniProt:Q20112_CAEEL protein_id:CAA84663.1| [wormORF-contam.fasta]
  • F37A8.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein F37A8.2 [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE20754 WBGene00009502 status:Partially_confirmed UniProt:Q20112 protein_id:CAA84663.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=CELE_F37A8.2 PE=4 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: positive regulation of growth rate [IMP]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEFESTENQ KPTMLASLDH LSLRNWASPF EEASTPPTSD DSFQSSSEDN LSLRNWAPLS  60
   61 PNPETEKSAK SLRNYSTNPL IPSYICDLCE SPKTSELRVA HDAPTFQTTY SYSISWDVEM 120
  121 DDVEHYRNVM ETVSKSSAIS SRSSFGGAPS PVVVKCDGPC KKEFPSNLLS TIGRCGHYLC 180
  181 TACFDIVKNA DGTYGCSSQQ CYWKGSSRQE SKKYYEKDIC RKQRAKALGM KDLGIDVKPA 240
  241 SSASSNPIKE TSDSSSETNC SLSSGTVSFN HRMLNSLTPV AENSVAIMMV LVEPVEVYGI 300
  301 VHSYVKMSFP LNTNLAKALG AMLHRKKKVL GDNVANGQLY FGFVNDDEKI GMRRIKSNYY 360
  361 DSLMVAEIPK FDDRVVLIFD VGDYVARGFK IYLE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..119] deduced N/A No confident structure predictions are available.
    2 View Details [120..267] FFAS03 1.02 Effector domain of rabphilin-3a
    3 View Details [268..394] MSA 2.01297 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  1.30336743219728 bayes_pls_golite062009
  • protein binding
    		•  0.510953193035899 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle