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Protein Overview: dmd-6

General Information:
Name(s) found: dmd-6 / CE20684 [WormBase]
Description(s) found:
Found 19 descriptions.
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  • WBGene00007058 locus:dmd-6 status:Partially_confirmed UniProt:Q9U3J5 protein_id:CAB05898.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 510 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: sex differentiation [IEALink to PubMed article]
    regulation of transcription, DNA-dependent [IEALink to PubMed article]
    Molecular Function: DNA binding [IEALink to PubMed article]
    transcription factor activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTLHLTFIA KSSKRSHFWL ELVWLNNQKK ILFCGAGHCK MSPHIIATVT IDDEHHHHHH  60
   61 RSNENYSPSS QDMDSPKPKG RILYCRKCEG HGEKVILKNH SPQCPYILCN CKSCEKLNYK 120
  121 RLKSFNKRNK EKIELAAALN AKRHAPESGS SVDDEEGFSR RSSFCSKTST PDMDSETRTS 180
  181 STTPITRSNS TMPTANGLEG RSGSLGHMTV MSYDIWKAKC ASERKRLEEE RLTKPELFTR 240
  241 SPSPGPMRKR AHTFVAPPTI HTPDIPVVAA KKMSLDEKVK GKFITLPTIP AMRIFVNEED 300
  301 EDVKPVTQMQ LAQPIALTPS PQMSLASTLA QIPMSTPVCM PSMITPTSFL DIPSTSSPML 360
  361 PFQISTTTSP MLQRQTPILT PQMSPFKPVG VATPQPPALS NLSAGQELSS FILHSVVLQA 420
  421 QQAQQKTAQQ LIPTSMPSEL ESTLSLLRLQ QSSLGDLIKL SGIQLPTLPT TQPMLTPQMP 480
  481 TLPMMQKALP TVLPGSFQPF LQPTLFTNPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] FFAS03 1.16 Snake phospholipase A2
    2 View Details [147..303] deduced N/A No confident structure predictions are available.
    3 View Details [304..510] MSA 8.166997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.389307920841874 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle